| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15420 |
|---|
| Symbol | |
|---|
| ID | 7760477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1514208 |
|---|
| End bp | 1515419 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643804439 |
|---|
| Product | aminotransferase AlaT |
|---|
| Protein accession | YP_002798732 |
|---|
| Protein GI | 226943659 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.169298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCA GTAAATCGAA CAAGCTCGCC AACGTCTGCT ACGACATTCG CGGGCCGGTG
CTCAAGCACG CCAAGCGTCT GGAGGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC
AACCCGGCGC CGTTCGGTTT CGAGGCCCCC GAGGAAATCC TCCAGGACGT GATCCGCAAC
CTGCCCACCG CCCAGGGCTA CAGCGACTCC AAGGGGCTGT TCAGCGCCCG CAAGGCGGTG
ATGCAGTACT ACCAGCAGAA GAAGGTGGAA GGCATCGGCA TCGAGGACAT CTACCTGGGC
AACGGTGTGT CCGAGCTGAT CGTCATGGTC CTGCAGGCCC TGCTCAACAA CGGCGACGAA
GTGCTGATCC CGGCGCCCGA CTACCCGCTG TGGACAGCGG CCACCAGCCT GGCCGGCGGC
AAGGCGGTGC ATTACCTGTG CGACGAGCAG TCGAACTGGT ATCCCGACAT CGCCGACATC
GAGGCCAAGA TCACCCGCAA CACCAAGGCG CTGCTGCTGA TCAACCCGAA CAACCCCACC
GGCGCGGTCT ACCCGCGGGA AGTGCTCGAG CGGATCGTCG AGGTCGCCCG GCAGCACAAC
CTTGTGATCT TCTCCGACGA GATCTACGAC AAGATCCTCT ACGACGACGC CCAGCACATT
TCCACCGCCT CCCTGGCGCC GGACGTGCTC TGCCTGACCT TCAACGGCCT GTCCAAGGCC
TACCGGGTGG CAGGCTTCCG CTCCGGCTGG GTAGCCATCT CCGGTCCCAG GCACAAGGCG
CAGAGCTACA TCGAGGGCCT CGACATCCTC GCCAACATGC GCCTGTGCGC CAACGTACCG
GCCCAGCACG CGATCCAGAC CGCCCTCGGC GGTTACCAGA GCATCAACGA CCTGATCCTG
CCCGGCGGCC GCCTTCTGGA GCAGCGCAAC CGTACCTGGG AGTTGCTCAA CGACATTCCC
GGAGTCAGTT GCGTCAAGCC GATGGGCGCG CTCTACGCCT TTCCGAAGAT CGACCCCAAG
GTCTGCCCGA TCCACAACGA CGAGAAATTC GTCCTCGACC TGCTGCTGCA GGAAAAGCTG
CTGATCGTCC AGGGCACCGC CTTCAACTGG CCGTGGCCGG ACCACTTCCG CGTGGTCACC
CTGCCGCGGG TCGACGACCT CGAACAGGCC ATCGGCCGCA TCGGCAACTT CCTCAAAACC
TACCGTCAAT AA
|
|---|
| Protein sequence | MQVSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP EEILQDVIRN
LPTAQGYSDS KGLFSARKAV MQYYQQKKVE GIGIEDIYLG NGVSELIVMV LQALLNNGDE
VLIPAPDYPL WTAATSLAGG KAVHYLCDEQ SNWYPDIADI EAKITRNTKA LLLINPNNPT
GAVYPREVLE RIVEVARQHN LVIFSDEIYD KILYDDAQHI STASLAPDVL CLTFNGLSKA
YRVAGFRSGW VAISGPRHKA QSYIEGLDIL ANMRLCANVP AQHAIQTALG GYQSINDLIL
PGGRLLEQRN RTWELLNDIP GVSCVKPMGA LYAFPKIDPK VCPIHNDEKF VLDLLLQEKL
LIVQGTAFNW PWPDHFRVVT LPRVDDLEQA IGRIGNFLKT YRQ
|
|---|
| |