Gene Avin_15340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15340 
Symbol 
ID7760469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1507282 
End bp1508031 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID643804431 
Producthypothetical protein 
Protein accessionYP_002798724 
Protein GI226943651 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG AGGAGCGCCT GCTCGCCGAG GTCCATGACG AGTTCGGCCT GATCCGCGTG 
CTGGAGGTCG GCGATTACCG CTTTCTCGAA TTCGGCGAGG CGGTGGAGCA GAGTTGCGTG
TTCACCACCG ATCCCAGTTG GCTGGAGTAC GACTACACCC GCGCCATGCT GCTCGGCGCA
CTCTGCCACG AGGCCCCGGA GAGCGCATTG TTCCTCGGCC TGGGGGCCGG CAATCTGACC
CAGGCCTGCC TCGCCTTCCT GTCGCTGGAG GATGTCGAAG TCATCGAGCT TCGTCCGGAG
GTGCCGCGCC TGGCCATGGA GTTCCTGGGA CTCGCCGACG ATCCGCGGCT GACCATCCGC
ATCGGCGATG CCCTGGAGCT GTTGCCCAGC GCGGAGCACG CCGATCTGAT CTTCGTCGAT
CTGTATACGG ATACCGGGCC GAACGTGGCC CATCTGGCAT GGAATTTTCT GGGCGACTGC
CAGAAGCGCC TCAATCCGGG CGGCTGGCTG GTCATCAACC AGTGGGCCGG GGACGATGGC
AAGCCCCTCG GCGCCGCATT GCTGCGCGGA CTCTATCATC GCCATTACTG GGAGTGTCCG
GTGAAGGAGG GCAACGTGAT CCTGCTGGTG CCCGCCGATC TCGACCAGTC CCTCGATCGC
GAGGGGCTAT TGGCGCGTGC CGAGGCCCTG GCGCCGCAAC TGGGCTACTC GCTGCGGCCG
CTGATCGAGG CTCTGCGGCC GGCGAGCTGA
 
Protein sequence
MEKEERLLAE VHDEFGLIRV LEVGDYRFLE FGEAVEQSCV FTTDPSWLEY DYTRAMLLGA 
LCHEAPESAL FLGLGAGNLT QACLAFLSLE DVEVIELRPE VPRLAMEFLG LADDPRLTIR
IGDALELLPS AEHADLIFVD LYTDTGPNVA HLAWNFLGDC QKRLNPGGWL VINQWAGDDG
KPLGAALLRG LYHRHYWECP VKEGNVILLV PADLDQSLDR EGLLARAEAL APQLGYSLRP
LIEALRPAS