Gene Avin_15000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15000 
Symbol 
ID7760435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1478375 
End bp1479160 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID643804397 
Producthydrolase, TatD-family 
Protein accessionYP_002798690 
Protein GI226943617 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTCG ATTCCCACTG CCATCTCGAT CGTCTCGATC TCGCTGCCCA TGGCGGTTCC 
CTGGAGGTCG CGCTGGAGGC GGCGCGTGCC CGGGGGGTCG GACATTTTCT GTGTATCGGC
GTGAGCGCGG ATAACGCGGC CGCGGTCAAG GCGCTGGCCG AGCGTTATGC CGACGTGGAT
TGCGCGGTCG GGGTGCATCC GCTGGATGTC GAGCCCGATG CCGTGCCCGC CCTCGACTGG
CTGCTCGGCG AACTCGCCCA TCCGCGGGTG GTCGCCATCG GCGAGACCGG GCTGGACTAT
CACTACCGGC CGGAGGCCGC CGCCCTGCAG CAACAGGCCT TTCGCCTGCA CCTGGAGGCC
GCGCGCCTGA CCGGCAAGCC GCTCGTCGTG CACACCCGCG CGGCGCGCGC CGATACCCTG
CGGCTGCTGC GCGAAGCGGC GCTGTCGCAG GGCGGTGTGC TGCACTGCTT CACCGAGGAC
TGGGAGATGG CCCGCGCGGC GCTGGATCTC GGCTTCTACA TCTCGCTGTC CGGCATCGTC
ACCTTCCGCA ATGCCGAGGC CCTGCGCGAA GTGGCCCGGC AGGTGCCGGC GGACCGTCTG
CTGGTGGAGA CCGACGCGCC TTACCTGGCG CCGGTTCCCC ATCGGGGCAA GCCCAACCTG
CCGCAATACG TGCGCGAGGT CGCGGAGTTT CTCGCCGAGC TGCGGGGTGT TCCCTTCGAA
ACGCTGGCCG AGCAGACCAC CGCTAACTTC CACCGCCTGT TTCCGTTGGC ACGGGTCGCC
CGCTGA
 
Protein sequence
MLVDSHCHLD RLDLAAHGGS LEVALEAARA RGVGHFLCIG VSADNAAAVK ALAERYADVD 
CAVGVHPLDV EPDAVPALDW LLGELAHPRV VAIGETGLDY HYRPEAAALQ QQAFRLHLEA
ARLTGKPLVV HTRAARADTL RLLREAALSQ GGVLHCFTED WEMARAALDL GFYISLSGIV
TFRNAEALRE VARQVPADRL LVETDAPYLA PVPHRGKPNL PQYVREVAEF LAELRGVPFE
TLAEQTTANF HRLFPLARVA R