| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_14830 |
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| Symbol | rluC |
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| ID | 7760419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1465839 |
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| End bp | 1466675 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643804381 |
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| Product | Pseudouridine synthase, RluC |
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| Protein accession | YP_002798674 |
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| Protein GI | 226943601 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.300608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCTATC GCATCCTGCG CAAGGGCGAG GTGCGGGTGA ACAAGGGACG GATCAAGCCC
GAGTACAAGC TGCAGGCGGG CGATCTGGTG CGCGTGCCAC CGCTGCGTCT GGCCGAGCGT
GACGAGCCGG TTCCGCTGGC GCAGGGACTG CTCGAGCGGC TCGAGGCAGC CATCGTCCAT
GAAGACAAGT CGCTGATAGT GCTGAACAAG CCGGCCGGGA TCGCCGTGCA TGGCGGCAGT
GGTCTCAGCC ACGGTGTCAT CGAGGCGTTG CGCCAGTTGC GTCCGGAGGC CAGGGATCTG
GAACTGGTGC ACCGACTCGA CCGGGATACC TCGGGGCTGT TGATGATCGC CAAGAAGCGC
AGCATGTTGC GCCATCTGCA CGAGGCGTTG CGCGGCGACG GCGTGGACAA GCGCTATCTG
GCGCTGGTGC GTGGAGCCTG GCCCAGTGCC CGGAAGCAGG TCAGCGCCCC GTTGCAAAAG
AATACCCTGC GTTCCGGCGA GCGGATGGTG GAAGTCGACG AGGAGGGGCG GGAGGCGCTG
ACCCTTTTCC GCGTGCTGCG GCGTTTCGGT GACTTCGCCA CGCTGGTGGA GGCCAAGCCG
GTCACCGGGC GGACGCATCA GATCCGGGTG CATGCCCGTC ATGCCGGGCA TCCTATCGCT
GGCGACGCCA AGTATGGGGA CGAGACGTTC ACCCGCGAGA TCCGTGCGCT CGGTGGCAAG
CGTCTGTTCC TGCATGCCTA TTCGCTGGCG GTGCCGCTGC CGGAGGGGGG CGAGTTGCGC
CTGGAGGCGC CGGTGGATGA GATGTGGGCA CAGGCTCTGG AGCGTTTGAG TGTCTGA
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| Protein sequence | MIYRILRKGE VRVNKGRIKP EYKLQAGDLV RVPPLRLAER DEPVPLAQGL LERLEAAIVH
EDKSLIVLNK PAGIAVHGGS GLSHGVIEAL RQLRPEARDL ELVHRLDRDT SGLLMIAKKR
SMLRHLHEAL RGDGVDKRYL ALVRGAWPSA RKQVSAPLQK NTLRSGERMV EVDEEGREAL
TLFRVLRRFG DFATLVEAKP VTGRTHQIRV HARHAGHPIA GDAKYGDETF TREIRALGGK
RLFLHAYSLA VPLPEGGELR LEAPVDEMWA QALERLSV
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