| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_14690 |
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| Symbol | lolC |
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| ID | 7760405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1450932 |
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| End bp | 1452182 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643804367 |
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| Product | Lipoprotein releasing system, hypothetical protein |
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| Protein accession | YP_002798660 |
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| Protein GI | 226943587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.319851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGAC CGCTGTCCGT CTTCATCGGC TTGCGCTACA CGGGTGCCAA GCGGCGCAAC
CATTTCGTCT CCTTCATTTC CCTGACCTCG ATGATCGGCT TGGCCTTGGG CGTGCTGGTG
ATGATCGTGG TGCTGTCGGT GATGAACGGT TTCGACCACG AGATGCGCAC TCGGGTGCTC
GGCATGGTCC CGCACGCGAC CATCGAAAGT CCGGTGCCGA TCGACGACTG GCGCAGCCTG
GCGGCGCAGG CACGGACGCA TCCGCAGGTC GTCGCGGTGG CGCCCTTCAC CCAGGTGCAG
GGGCTCCTGA CCCATGACGG CCAGGTACAG AAGGTGCTGA TCAACGCCGT CGATCCCGCT
CTCGAACCCC ACGTATCGAT CATCGGCGAC TTCTTTCGCC AGGGCGGCTT GGCGGCGTTG
CAGCCGGGCG GGTTCGGCAT CCTCATCGGC GACAAGGCCG CTGCCAAGCT GGGTGTCGGC
ATCGGCGACC GGGTCACCTT CATCGCTCCC GAGGTGGCGG TGACCCCGGC CGGCATGTTT
CCTCGAATGA AGCGCTTCAC CGTGCAGGGG ATCTTCCATG TCGGCGCCGG CGAGCTGGAC
GGCTACGTGG CCATGGCCCA TCTCGACGAC ATCGGGCGGC TGCAGCGCTG GAAAAGCGGC
CAGGTCCAGG GCCTGCGGCT CAGGTTCGCC GACCTGTTCC AGGCGCCGCG GACCGCCTGG
GCGATAGCGG AGCGGCTGAA GGGCGGAGAT TTCTACGCCC GCGACTGGAC GCGCAGCCAC
GGCAATCTGT ACCAGGCGAT CCGCATGGAA AAGAACATGA TCGGCCTGCT GCTGCTGCTG
ATCGTCGCGG TGGCGGCGTT CAATATCATT TCCACGCTGG TGATGGTGGT CACCGACAAG
AAGGGCGATA TCGCCATCCT GCGCACCCTG GGCGCCACGC CGGCGCAGAT CATGGCCACC
TTCATGGTGC AGGGCACGGT GATCGGCGTG ATCGGCACCC TGATAGGTGG CGCCCTGGGC
ATTCTCGCCG CGCTCAACAT CGGCAGTTGG ATCGCCGCCC TCGAGGGGCT GCTGGGCCAC
AAGTTCCTCA GTGCGGACGT CTATTTCATC GATTACCTGC CTTCGCAACT GATGGGCGAG
GACGTGCTGC TGGTCTGTGG GGCGGCCCTG TCGCTGAGTT TCCTCGCCAC CCTGTATCCG
GCCTGGCGCG CCGCGCGTAC CCGGCCCGCG GAGGCCCTGC GTTATGAGTG A
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| Protein sequence | MFRPLSVFIG LRYTGAKRRN HFVSFISLTS MIGLALGVLV MIVVLSVMNG FDHEMRTRVL
GMVPHATIES PVPIDDWRSL AAQARTHPQV VAVAPFTQVQ GLLTHDGQVQ KVLINAVDPA
LEPHVSIIGD FFRQGGLAAL QPGGFGILIG DKAAAKLGVG IGDRVTFIAP EVAVTPAGMF
PRMKRFTVQG IFHVGAGELD GYVAMAHLDD IGRLQRWKSG QVQGLRLRFA DLFQAPRTAW
AIAERLKGGD FYARDWTRSH GNLYQAIRME KNMIGLLLLL IVAVAAFNII STLVMVVTDK
KGDIAILRTL GATPAQIMAT FMVQGTVIGV IGTLIGGALG ILAALNIGSW IAALEGLLGH
KFLSADVYFI DYLPSQLMGE DVLLVCGAAL SLSFLATLYP AWRAARTRPA EALRYE
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