| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_14330 |
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| Symbol | |
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| ID | 7760369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1409710 |
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| End bp | 1410915 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643804331 |
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| Product | Secretion protein HlyD family |
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| Protein accession | YP_002798624 |
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| Protein GI | 226943551 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.774042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGC CTTCTTCCTC ACGCGGTTTC ACGCGCCTGT CGCTGGCGCT GCTCCTGTCG
CTGGCCGCGG CGGGGGCGGG CTGGTATTTC CTCTCGCAGC GCCAGGTCGG CATGCCGCCG
CCCATGGACG AGGCCACGCC GGTGCAGGCC GGCACGGCGA CGCTGGCCAG CGTGCCGGTC
CACCTGGACG CGCTGGGCAC GGTCAGCGCC AACTACACGG TGACGGTCAC CAGCCGGATC
GACGGAACCC TGCAGGCCGT GCACTTCACC GAGGGCCAGC GGGTGAAGAA GGGCCAGTTG
CTGGCGGAGA TCGACACCCG CACCTATCAG GCCACGCTGG CCCAGTATCA GGGCGAACTG
GCGGAAAACC AGGCGCAACT GGCCAACGCC AAATTGACCC TGACGCGCTA CAGCCGCCTG
TACGCCAAGG ATTCCCTGGC CCGCCAGGAC TTGGACACGC AGATCGCCCT GGTCGAACAG
TATGCCGGCG CGGTGAAGGC CAGCCAGGCG CAGATCCGCT CGGCGCAGGT GAACCTGGGC
TACGGGCGGA TCGTCGCGCC CATCGACGGC TACGTCGGCC TGCGCCAGGT GGACCCCGGC
AACATGGTGC ACGCCAGCGA TACCAGCGGC ATCGTCACCA TCACCCAGAC CCAGCCCATC
GCGGCGAAAT TCAGCATTCC CCAGGCCAAC CTGCAGGACG TGCTGCAGCC GCTGCGCCGC
GGCGAGAGCC TGGCGGTCGA GGCGCTGTCG CAGCAGGGCG ACGAGGTGCT GGCCGGGGGC
ACGGTGAAGT TCATCAGCAA CGAGATCGAC ACCGCGACCG GCAGCGTGCA GCTCAAGGCG
CTGTTCGACA ACCCGGACGA GCGGCTCTAT CCCAACCAGT TCGTCAACGT GCGGCTGCGC
ATCGGCACCC TGGAGAACGC CGTGCTGGTG CCGGCGGCGG CGGTGCAGCT CAGCGACGCC
GGCAAGTTCG TCTACCTGAT CGGCCAGGAC GATACCGTCA AACGCCAGAC CGTCACGGTC
GGGCCGAGCG CCGCGGACGG CCGGGTGGCG ATCCTCTCCG GCGTCGCCGG CGGCGAGCGG
GTGGTGACCC AGGGCGTCGA CCAGTTGGGC AACGGTTCCA GGGTCAGCGT GGTGGATGCG
ACCGAGGTGG ACATCAGCGT CATCGAGACC GGCAAGCGGC CCGCTGGCAT GCCGCCGGGG
CCCTGA
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| Protein sequence | MIQPSSSRGF TRLSLALLLS LAAAGAGWYF LSQRQVGMPP PMDEATPVQA GTATLASVPV
HLDALGTVSA NYTVTVTSRI DGTLQAVHFT EGQRVKKGQL LAEIDTRTYQ ATLAQYQGEL
AENQAQLANA KLTLTRYSRL YAKDSLARQD LDTQIALVEQ YAGAVKASQA QIRSAQVNLG
YGRIVAPIDG YVGLRQVDPG NMVHASDTSG IVTITQTQPI AAKFSIPQAN LQDVLQPLRR
GESLAVEALS QQGDEVLAGG TVKFISNEID TATGSVQLKA LFDNPDERLY PNQFVNVRLR
IGTLENAVLV PAAAVQLSDA GKFVYLIGQD DTVKRQTVTV GPSAADGRVA ILSGVAGGER
VVTQGVDQLG NGSRVSVVDA TEVDISVIET GKRPAGMPPG P
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