Gene Avin_14190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14190 
Symbol 
ID7760355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1393427 
End bp1394566 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content72% 
IMG OID643804317 
ProductGeneral substrate transporter 
Protein accessionYP_002798610 
Protein GI226943537 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGC AATCCGCCGG CATCGCCGCG CCGGGCATGG CCGCACAGTT CGGCCTGACT 
TCCACCATGA TGGGCGCGGT GTTCAGCGCC AGCATCCTCG GCCTGCTGCC CGGCGCCCTG
GGCGGCGGCT GGCTGGCCGA CCGCATCGGC CGCAAGGGCG TGCTGATCGG CGCCGTGGCG
CTGTTCGGCC TGTTCTCCAT CGCCACCGCC CTGGTCTGGG ACTTCTACAG CCTGCTGGCG
GCGCGCTTTC TGACCGGCGT AGGCCTGGGC GCGGCGCTGC CCAACCTGAT CGCCCTGTCC
TCGGAGGCGG CCGACGCGCG TTCCCGCGGC ACCGCGGTGA GCCTGATGTA CTGTGGCGTG
CCGTTGGGCG GCGCGCTGGC GGCACTGGTC GGTATGGCCG GCCTGGCCAG CGGCTGGAAA
GCGGTGTTCT ACGTCGGCGG GGTGGCGCCG CTGCTGGTCG CGCCGTTGCT GGTGCTGTGC
CTGCCGGAAT CGGCGGCCTT CCACGAGCAG CGGAGCGTCA GGTCCGCAGC GCCGCGCGTA
TCCCTCCGGC AGGGACTGTT CCAGGAGGGG GCGGCCGTGC CGACCCTGCT GTTGTGGATC
AGCTACTTCT TCACCCTGAT GGTCGTCTAC ATGCTGCTCA ACTGGCTGCC CTCGCTGCTG
GTCGGCCAGG GCTTCTCGCG GTCCCAGGCC GGCACGGTGC AGATCCTCTT CAATATCGGC
GGCGCCACCG GTTCGCTGCT GTTCGGGCTG CTGCTGGATC GCTGGCGGCC GCTGGCGCTG
GTGGCGCTGA CCTACACCGG CATCCTCGCC GCCCTGGCCG GGCTGAGCCT GTCGACGAGC
TTCGCCAGCA TGCTGCTGGC CAGTTTCTCC GCCGGCTTCT TCTCCATCGG CGGGCAACTG
GTGCTCTACG CCCTGGCGCC GCTGTTCTAT CCCACCGCGA TGCGCGCCAC CGGCGTCGGC
GCCGCCGTGG CGGTCGGTCG CCTGGGCTCG ATGAGCGGCC CGCTGGTGGC CGGGCAGATG
CTGGCGATGG GCACCGGCGC CACCGGCCTG CTGCTGGCCT CTGCCCCCGG CGTCGTGGTG
GCCGCGGCGG CGGTGTTCTA CCTGCTCGGC CAGCGCCGCG CCGAGGGCCT GACCATCTGA
 
Protein sequence
MDLQSAGIAA PGMAAQFGLT STMMGAVFSA SILGLLPGAL GGGWLADRIG RKGVLIGAVA 
LFGLFSIATA LVWDFYSLLA ARFLTGVGLG AALPNLIALS SEAADARSRG TAVSLMYCGV
PLGGALAALV GMAGLASGWK AVFYVGGVAP LLVAPLLVLC LPESAAFHEQ RSVRSAAPRV
SLRQGLFQEG AAVPTLLLWI SYFFTLMVVY MLLNWLPSLL VGQGFSRSQA GTVQILFNIG
GATGSLLFGL LLDRWRPLAL VALTYTGILA ALAGLSLSTS FASMLLASFS AGFFSIGGQL
VLYALAPLFY PTAMRATGVG AAVAVGRLGS MSGPLVAGQM LAMGTGATGL LLASAPGVVV
AAAAVFYLLG QRRAEGLTI