Gene Avin_13960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_13960 
Symbol 
ID7760333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1360420 
End bp1363509 
Gene Length3090 bp 
Protein Length1029 aa 
Translation table11 
GC content68% 
IMG OID643804289 
ProductGlycosyl transferase, family 51 
Protein accessionYP_002798588 
Protein GI226943515 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTAA TTTGGCAGCG AGATGAACAG CGATCCGCAC TCTCCGAGCG CGACCTGCCG 
ACCTCAGCGC CCCCGCCTTC CCACCGGTTG CGCTGGCGCC TGCTGGTCTG GTTCGTGGTG
CTGGCCGGTG CCGCTGTGCT CGGCGTACTG CTCTATTTCG AACTGCAGAC CTCGCGCCTG
CAGTCGCGGG AATTGAGCCG CTACGCGGCG ACCCTCGGCT ACTCCGTGGG CGATGGCCCG
AGTCCGGCGA TCCACTTTCC GGAATACGGC CCCTACGATC GCCGCCTGGG CTACACGGCG
TTGCCCGAAT GGCTGCCGCG GCTCGAACAG CGGGGTTTCG AGATCACCCG CCAGGCGCGC
TTCTCCCAGC CGCTGCTGGA ATACAGCCAC CGCCGCCTGT TCCCGCCCTA CGCGGAAAAA
CCCCAGGCCG GGCTGACCAT CAGCGACTGC CGCGGCATGC CGCTTTATAG CTACCGCCTG
CCGAGGGAGT TCTATTCCAG CTATGCCAGT ATTCCGCCGC TGGTGGTGCA CAGCCTGCTG
TTCATCGAAA ACCGCTATCT GCTCGACCCG TCGCAGCCAC TGGCCAACCC CGCGGTGGAC
TGGCCGCGCT TCGCCAAGGC CGCGCTCTCG CAGGTCCGCG AGATGTTCGG TTTGTCCGGC
CAGACGGCCG GCGGCAGCAC CCTGGCCACA CAGATCGAGA AATACCGCCA TTCGCCGGAT
GGCCTGACCG ACTCGGCGAT GGAAAAACTG CGGCAGATGT TCTCCGCCAG CGTGCGTGCC
TACCAGGGTG GAGCGCAGAC GATGGAGGCC CGGCGGAACG TGGTGCGCGA CTACCTGAAC
AGCGTGCCGC TCGCCGCCGC GCCGGGCTAC GGCGAAGTGC ACGGCCTGGC CGACGGCCTG
CGGGTCTGGT ACGGCACCGA CTTCGCACAG GTCAACCGGC TGCTCGCCTC GGCGGACGCC
GATCCGGCCG AGCGCGGCCT GGCGTTGCGC CAGGTGCTCT CGCTGCTGAT CGCCCAGCGT
CGCCCCTCCC ACTACCTGAT CGCCGGCCGC GAAGAACTGG CCACCCTCAC CGATAGCCAC
ATCCGCCTGC TGCGCAAGGG CGGCCTGCTC GACCCCGTGC TGGCCGAGGC CGCCCTCGCC
CGGCGCGCCG TGTTCCGCGA CTGGATGCAG GAGCCCGTGG TCCAGCCTGT CGAAACCACC
AAGGGCATCA GTGTCGCCCG CAGCCGCCTG GCCACCCTGC TGCAACGCTC GTTGTACGAC
CTCGATCGTT TCGACCTGTC CGCCAGCACG CCCCTGCAGG GCGAACTGCA GGATGCGGTC
ACCCGCTATC TGGGCCAACT GGCCGATCCG TCGTTCGCCG AAGGCATCGG TCTGTTCGGC
GAACGCCTGC TGTCGCCGGA GAAAACCGCC GAAGTGCGCT ACAGCTTCAC GCTGTTCGAG
CGCAGTGGCG ACAGCTTCCT CGTGCGGGTG CAGACCGACA GCACCACACA ACCCTTCGAT
ATCAACGAAG GCAGCAAGCT GGAGCTGGGC TCGACCGCCA AGCTGCGGGT GCTGACCACC
TATCTGGAAA TCATCGCCGA GCTGCACGCG CGTTTCGCCG GACAGGAACG GACCGCCCTG
CAGGCAGCCA GGGCCGAGAC GGAGCCGCTG GATTTCCTGA CCCAGTGGGC CATCGAGTGG
CTGATGGCGA ATCCCGGCGG AACCCTGCCG GCCATGCTGG ACGCGGCCCT CGAACGGCGC
TACTCGGCGA GCCCCGGAGA GAGCTTCTTC ACCGGCGGCG GCCTGCACAC CTTCACCAAC
TTCAACAGGG TGGACAACGG ACGCCGACCG ACCATGCGCG AGGCCCTGCG CGACTCGATC
AACCTGCCTT TCGTGCGCCT GCTGCGCGAC ATCGTCCGCT ACACCATCTA CCAGTCGCCG
AACAACAGCG TCGCCCTGCT CAAGGACGAC CAGGACCCGC GCCGCCTGGA ATACCTGACC
CGCTTCGCCG ACCGCGAGGG CACGGTCTAC CTGCGCCGCT TCTGGAACAA GTACCGGGGC
AAGAGCAGCG ACGAGCGCCT GGCCACCTTC CTCGAAGGCC TGCGCGTCAC ATCGGTGCGG
CTCGCCGCGG TGCACCGCTA CCTGTTGCCG CAGAGCGACC GCGCCACCTT CGATACCTTC
CTGCGCGCCC ACCTGCCGAA CGACCGCACC CTCACCGAGA AACGTCTCGA CAGCCTCTAC
CGCAGCTACG GCCCGGGCGC CTACAGCCTG CCCGACCAGG GCTACATCGC CCGGGTCCAT
CCCCTCGACC TGTGGCTGCT GGGCTATCTG ATCCAGCACC CGGCGGCCAG CTACCAGGAG
GTGGTGGAAG CCAGCCGCGA CGAGCGCCAG GAAGTCTACG GCTGGCTGTT CAAGAGCCGG
CATCGCAGCG CCCGGGACAG CCGCATCCGC ACCATGGTGG AGGTCGAGGC CTTCCTCGAC
ATCCACCAGC GCTGGCAGCA GCTCGGCTAT CCCTTCCCCC ATCTGGTGCC TTCGCTGGCC
ACCGCCCTGG GCAGTTCGGG AGATCGCCCG GCGGCGCTCG CCGAGCTGAT CGGCATCATC
CTCAACGATG GCGTGCGCCT GCCGGTGGTG CGCATCGACA ACCTGGAATT CGCCGTCGAC
ACCCCCTACG AAACCCGTCT CGGCCTCGCC CCCGGTCGCG CCCGCCGGGT ATTGGCCCCG
GAGGTCGCGG CAGCCCTGCG CGGCGCTCTC GCCCAGGTAG TGGAAAACGG CACGGCACGG
CGCCTGTTCG GCAGCTTCCA GCAGGCCGAC GGCAAGCCCC TGACCGTCGG CGGCAAGACC
GGCACCGGCG ACAACCGTAT CCAGCGGGTC GCTCGCGGTG GCTATGTGAT CAGCTCTCAG
GCACTGAACC GCACCGCCAC CTTCGTCTTC TACCTCGGCC CGAACCACTT CGGCACCCTC
ACCGCCTACG TTCCCGGTCG CGCCGCGGAG AAGTTCCGCT TCACCTCGGC ATTGCCGGTA
CAGGTGCTCA AGGGCATGGC GCCGATCCTG CAGCCCTATC TGCGGGGACA GAACAGCCTC
TGCCAAGCAC CGGCGAGCGC GCGGAACTGA
 
Protein sequence
MGVIWQRDEQ RSALSERDLP TSAPPPSHRL RWRLLVWFVV LAGAAVLGVL LYFELQTSRL 
QSRELSRYAA TLGYSVGDGP SPAIHFPEYG PYDRRLGYTA LPEWLPRLEQ RGFEITRQAR
FSQPLLEYSH RRLFPPYAEK PQAGLTISDC RGMPLYSYRL PREFYSSYAS IPPLVVHSLL
FIENRYLLDP SQPLANPAVD WPRFAKAALS QVREMFGLSG QTAGGSTLAT QIEKYRHSPD
GLTDSAMEKL RQMFSASVRA YQGGAQTMEA RRNVVRDYLN SVPLAAAPGY GEVHGLADGL
RVWYGTDFAQ VNRLLASADA DPAERGLALR QVLSLLIAQR RPSHYLIAGR EELATLTDSH
IRLLRKGGLL DPVLAEAALA RRAVFRDWMQ EPVVQPVETT KGISVARSRL ATLLQRSLYD
LDRFDLSAST PLQGELQDAV TRYLGQLADP SFAEGIGLFG ERLLSPEKTA EVRYSFTLFE
RSGDSFLVRV QTDSTTQPFD INEGSKLELG STAKLRVLTT YLEIIAELHA RFAGQERTAL
QAARAETEPL DFLTQWAIEW LMANPGGTLP AMLDAALERR YSASPGESFF TGGGLHTFTN
FNRVDNGRRP TMREALRDSI NLPFVRLLRD IVRYTIYQSP NNSVALLKDD QDPRRLEYLT
RFADREGTVY LRRFWNKYRG KSSDERLATF LEGLRVTSVR LAAVHRYLLP QSDRATFDTF
LRAHLPNDRT LTEKRLDSLY RSYGPGAYSL PDQGYIARVH PLDLWLLGYL IQHPAASYQE
VVEASRDERQ EVYGWLFKSR HRSARDSRIR TMVEVEAFLD IHQRWQQLGY PFPHLVPSLA
TALGSSGDRP AALAELIGII LNDGVRLPVV RIDNLEFAVD TPYETRLGLA PGRARRVLAP
EVAAALRGAL AQVVENGTAR RLFGSFQQAD GKPLTVGGKT GTGDNRIQRV ARGGYVISSQ
ALNRTATFVF YLGPNHFGTL TAYVPGRAAE KFRFTSALPV QVLKGMAPIL QPYLRGQNSL
CQAPASARN