Gene Avin_13940 details

Gene Information

• Locus tag: Avin_13940
• ID: 7760331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1355097
• End bp: 1357145
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643804287
• Product: TonB-dependent receptor
• Protein accession: YP_002798586
• Protein GI: 226943513
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1629] Outer membrane receptor proteins, mostly Fe transport

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.137662
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGCC ATTCCCTCGC CTGGACCCTC GGACTGAGCC TGGTCCCGGC CATCGGGGCG 
AGCGAGCCGC TGGAACTGGA GTCCACCGTG GTCAGTGCCA GCGCCCTGGC CAAGAAGCCC 
CACGAAATGA CCACCCCGGC CGAAGTTTTG GAAGGCGACG AACTGGTCCT GCGCCGCGAG 
GCGACCCTCG GCGAGACCCT GGAAGGTCTG CCCGGCGTAC GCTCGGCGAG CTTCGGTGCC 
GGGGTCGGGC GGCCGATGAT CCGCGGCCAG CAGGGCGCGC GGGTGAAGAT GCTGAGCGAT 
GGCGTGGATG TGCTCGACGC CTCGAACATC AGCCCGGACC ACGCGGTGAG CAGCGAGCCG 
CTGATGGCCG AGCGCATCGA GGTGCTCAAG GGACCGGCGA CCCTGCTCTA CGGCGGCGGC 
GCGATCGGCG GGGTGGTCAA CGTGATCGAC AAGAAGGTGC CCACCCATGT CCCGGAAAAC 
GGCTACGAGG GCGAGCTGGA GCTGCGTGCC AACAGCGTGG CCAACGAGGG TTCCGGCGTG 
TTCGGCATCA CCGCCGGCAG CGGCAACTTC GCGGTGCGCG TCGAGGGGGT CAAGCGCCAG 
GCGGACGACT ACGAGATCCA TGGCTCGCCG AGCAAGCAGG ATGGCTCGTA CAACGACACC 
GATACCTTCA GCCTGGGCGC CAGCTTCGTC GGCGAACGCG GCTACCTCGG CGTGGCCTTC 
ACCGAGCAGA ACAATCGCTA TGGCCTGCTC GGTCACCAGC ACGCCGACTG CCACCTCGAC 
GGGCCGGCCT GGCATTGCGG CGAGCATGAG GACGAGCACG AGGAGGAACA CGAAGACGAG 
GAGCATGAGG ATCACGACGA GCATGACCAC GAGCACGAGG GAGAGGGCGT GCCCTACGTG 
GATCTCCGTC AGTATCGCTG GGACCTGCGC GGCGAACTCC AGGACCCGCT GCCCGGCTTC 
GAGCTGGCGC GCCTGCGCGT CGCCCACAGC GATTACCGCC ATGAGGAGGT CGAAGGGGGG 
CAGGTCAGTA CCCGCTTCGA CAACGATGCC AGCGACGCCC GTCTGGAGTT GACCCACCAG 
CCGCTGTTCG GCTGGCGTGG CGTGCTCGGC GGACAGACTC TGCGCCGCGA CTTCAGGGCT 
AGCGGCGAGG AGGCCTACGT GCCGCCGACC ATCACCCGCA ACCATGCGCT GTTCCTGCTC 
GAGGAATACA CCGACGGCGC CTGGCGCTAC GAACTGGGCC TGCGCCACGA ATGGCAGGAC 
ATCGAGGCCG AGGGGCGACC GGACAAGGAC CACCGCGGCA CCTCGTTCTC CGCCGGCGCG 
GTGTGGAGCT TTGCGCCGAA CTACTCGCTC GGCTTCTCGC TGAGCCGTTC GCAGCGCCTG 
CCCAGCGCCG AGGAGCTCTA CGCCGACGGC CCGCATGCGG CGACCCGCAC CGTCGAGCTG 
GGCGACCCCG AACTGGACGA GGAAACCTCG CACAACCTCG AGCTGACTCT GCGCAAGTTC 
GCCGGGCGCA CCACTTTCAG CTTCACCCTC TATCGCAACC AGGTGGACGA CTACATCTAT 
GCCGCCGATA CCGGGCGCGA CATCGGCTCC GGCTACCGAG AGATCGAGTA CCGGCAGCAG 
GATGCGCTGT TCACCGGCGT CGAGGGCGAG GTGCGCTTCC AGGCCACCGA CGCCACGGCC 
CTGACCCTGT TCGGCGACCA TGTGCGCGGC AAGCTGCTCG ATGGCGGCGG CGACCTGCCA 
CGGATTCCCG CGGGGCGCCT CGGTGTGCGC CTGGACCACG GTTTCACTTC CAGCCTCGAC 
GGTCAACTGG AGTTCTACCG GGTGAATCAC CAGCACCGCC TGGCCGACTT CGAGACCGAG 
ACTTCCGGCT ACAGCATGCT GGGCGCCAGC CTCACCTACC ATGGCGCGCT CCGGCGTGCC 
GACTATCAGA TCTATCTCAA GGGAGACAAC CTGCTGGACG AGAAGGCCCG CGACCACAGT 
TCCTTCATCA AGGACGACGT GGTGCAGCCG GGACGCAACC TGACCCTGGG GCTGCGGATG 
ACATTCTGA 

 

Protein sequence

MKRHSLAWTL GLSLVPAIGA SEPLELESTV VSASALAKKP HEMTTPAEVL EGDELVLRRE 
ATLGETLEGL PGVRSASFGA GVGRPMIRGQ QGARVKMLSD GVDVLDASNI SPDHAVSSEP 
LMAERIEVLK GPATLLYGGG AIGGVVNVID KKVPTHVPEN GYEGELELRA NSVANEGSGV 
FGITAGSGNF AVRVEGVKRQ ADDYEIHGSP SKQDGSYNDT DTFSLGASFV GERGYLGVAF 
TEQNNRYGLL GHQHADCHLD GPAWHCGEHE DEHEEEHEDE EHEDHDEHDH EHEGEGVPYV 
DLRQYRWDLR GELQDPLPGF ELARLRVAHS DYRHEEVEGG QVSTRFDNDA SDARLELTHQ 
PLFGWRGVLG GQTLRRDFRA SGEEAYVPPT ITRNHALFLL EEYTDGAWRY ELGLRHEWQD 
IEAEGRPDKD HRGTSFSAGA VWSFAPNYSL GFSLSRSQRL PSAEELYADG PHAATRTVEL 
GDPELDEETS HNLELTLRKF AGRTTFSFTL YRNQVDDYIY AADTGRDIGS GYREIEYRQQ 
DALFTGVEGE VRFQATDATA LTLFGDHVRG KLLDGGGDLP RIPAGRLGVR LDHGFTSSLD 
GQLEFYRVNH QHRLADFETE TSGYSMLGAS LTYHGALRRA DYQIYLKGDN LLDEKARDHS 
SFIKDDVVQP GRNLTLGLRM TF