Gene Avin_13820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_13820 
SymbolrecO 
ID7760319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1343293 
End bp1343985 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID643804275 
ProductDNA repair protein RecO 
Protein accessionYP_002798574 
Protein GI226943501 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCC AACCTGCCTT TATCCTGCAT AGCCGTCCCT ACAGGGAAAG CAGCGTGCTG 
GCGGATTTCT TCACCCCGCA AGGGAGACTG CGTGCTGCGA TGCGTTCCGC GCGCGGCAAA
TCTGGCAGTC TGGCTCGACC CTTCGTACCG CTGGAGCTGG TATTGCGCGG CCGGAGCGAG
CTGAAGAGCG TCGCCCGCCT GGAAAGCAAC GGCTCTCCCC GCTGGTTGAC TGGCGCCAGC
CTGTTCAGCG GGCTCTACCT GAACGAGTTG TTGATCCGTC TCCTGCCTCC TGAAGATCCC
TTTCCGTCCC TGTTCGAACA TTACTCCCTG ACCCTCGACG CATTGGCTGT CGGGCGTCCG
CTGGAGCCGC TGTTGCGCGC CTTCGAATGG CGCCTGCTGG TGGAGCTGGG CTATGGTTTT
TCCCTGGATC GCGATCTGAA CGGCCAGTCC GTGCAGGTCC GAAGGCTCTA CCGCTTGCTG
CCGGATGTCG GACTGGAGCC CGTCGATCAG TTGCAGCCGG GCCTGTTCAG TGGTGGCGAA
CTATTGGCGA TGGCCGAGGC CGACTGGCGG TTTCCCGGTG CTCTGGCCGC GGCCAAGCGC
CTGATGCGCC AAGCCCTGGC GCCTCATCTC GGCGGTCGGC CGCTGGTCAG CCGCGAACTC
TTCACGAATC TCAAGGAGTC TTCCCGTGAC TGA
 
Protein sequence
MTSQPAFILH SRPYRESSVL ADFFTPQGRL RAAMRSARGK SGSLARPFVP LELVLRGRSE 
LKSVARLESN GSPRWLTGAS LFSGLYLNEL LIRLLPPEDP FPSLFEHYSL TLDALAVGRP
LEPLLRAFEW RLLVELGYGF SLDRDLNGQS VQVRRLYRLL PDVGLEPVDQ LQPGLFSGGE
LLAMAEADWR FPGALAAAKR LMRQALAPHL GGRPLVSREL FTNLKESSRD