Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_13820 |
Symbol | recO |
ID | 7760319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1343293 |
End bp | 1343985 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643804275 |
Product | DNA repair protein RecO |
Protein accession | YP_002798574 |
Protein GI | 226943501 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCC AACCTGCCTT TATCCTGCAT AGCCGTCCCT ACAGGGAAAG CAGCGTGCTG GCGGATTTCT TCACCCCGCA AGGGAGACTG CGTGCTGCGA TGCGTTCCGC GCGCGGCAAA TCTGGCAGTC TGGCTCGACC CTTCGTACCG CTGGAGCTGG TATTGCGCGG CCGGAGCGAG CTGAAGAGCG TCGCCCGCCT GGAAAGCAAC GGCTCTCCCC GCTGGTTGAC TGGCGCCAGC CTGTTCAGCG GGCTCTACCT GAACGAGTTG TTGATCCGTC TCCTGCCTCC TGAAGATCCC TTTCCGTCCC TGTTCGAACA TTACTCCCTG ACCCTCGACG CATTGGCTGT CGGGCGTCCG CTGGAGCCGC TGTTGCGCGC CTTCGAATGG CGCCTGCTGG TGGAGCTGGG CTATGGTTTT TCCCTGGATC GCGATCTGAA CGGCCAGTCC GTGCAGGTCC GAAGGCTCTA CCGCTTGCTG CCGGATGTCG GACTGGAGCC CGTCGATCAG TTGCAGCCGG GCCTGTTCAG TGGTGGCGAA CTATTGGCGA TGGCCGAGGC CGACTGGCGG TTTCCCGGTG CTCTGGCCGC GGCCAAGCGC CTGATGCGCC AAGCCCTGGC GCCTCATCTC GGCGGTCGGC CGCTGGTCAG CCGCGAACTC TTCACGAATC TCAAGGAGTC TTCCCGTGAC TGA
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Protein sequence | MTSQPAFILH SRPYRESSVL ADFFTPQGRL RAAMRSARGK SGSLARPFVP LELVLRGRSE LKSVARLESN GSPRWLTGAS LFSGLYLNEL LIRLLPPEDP FPSLFEHYSL TLDALAVGRP LEPLLRAFEW RLLVELGYGF SLDRDLNGQS VQVRRLYRLL PDVGLEPVDQ LQPGLFSGGE LLAMAEADWR FPGALAAAKR LMRQALAPHL GGRPLVSREL FTNLKESSRD
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