Gene Avin_13730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_13730 
SymbolmucD 
ID7760311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1334230 
End bp1335651 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content59% 
IMG OID643804268 
ProductHtrA serine protease 
Protein accessionYP_002798567 
Protein GI226943494 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAGG TTGGTTTTAA GTCCTTCGCC TCCGTTTTGG CAGGTGCCCT GCTGCTCGGG 
CAGTCGCTCT TCGTGCAGGC GCAATTACCG GAGTTCACCT CGCTGGTGGA GGAAGCCTCG
CCGGCGGTAG TCAATATCAG TACCCGGCAA AAGCTTCCCG ATCGCTCCAC GGTTCAGGGA
TTGCCTGATC TCGAGGGGCT TCCGCCGCTT TTCAGGGAGT TCCTGGAGCG CAGCATTCCG
CAACTTCCGC GTACTCCGGA TAACGGGCGG CAGCGTGAGG CGCACTCCCT GGGCTCGGGT
TTCATCATTT CTCCAGATGG CTATGTTCTA ACCAACAACC ATGTGGTGGC CGATGCCGAT
GAAATCATCG TGCGTTTGTC CGATCGCAGT GAGCTCGAGG CCGAGCTGGT CGGGGCCGAT
CCTCTTACCG ATGTAGCTTT GTTGAAGGTC AAGGGTTCGA ATCTCCCCAC AGTCAAACTG
GGACGTACCG ACCAATTGAG AGTCGGGGAA TGGGTTCTGG CCATCGGTTC CCCTTTCGGT
TTCGATCATT CCGTGACTGC GGGCATCATC AGTGCCACGG GGCGAAGCCT GCCGAACGAG
AGTTACGTTC CTTTCATCCA GACCGATGTG GCCATCAATC CCGGTAACTC CGGCGGGCCG
CTCTTCGATC TGGATGGACG GGTCATAGGC ATCAACTCCC AGATATTCAC CCGGTCGGGG
GGCTTCATGG GCTTGTCTTT CGCGATTCCC ATCGAGGTTG CCATGGGCGT GGCCGATCAG
TTGAAGGCCA CTGGCAAGGT TGCTCGCGGT TGGTTGGGAG TAATCATTCA GGAAGTCAAC
AAGGATCTGG CTGAGTCCTT TGGTCTGGAT CGGCCGGCCG GAGCGTTGGT CGCCCAGGTC
TTGGAGGATG GACCGGCGGA CAAGGGCGGT TTGCAGGTCG GCGATGTCAT TCTCAGCCTA
GATGGTCATC CTATTGTGAT GTCGGCCGAT CTGCCGCATC TGGTTGGGGG GCTCAAACCC
GGGGCTGCAG CCAATCTCGA GGTGGTGCGT GACGGCAAGC GGAGGAACAT CGCTATCACT
GTCGGGGCCT TGCCGGAGGA GGGGAATGGG GTTCAGCCGA GTATCGCGGG CACGGAACAG
AGCAGCAATC GCCTTGGAGT GACGGTCACC GAACTGACGG CTGAGCAGAA GAAATCCCTT
GATCTCAAGG GTGGTGTGGT CATTCGCGAA GTGCTGAACG GTCCGGCCGC ATTGATCGGA
CTGCGGCCTG GCGATGTAGT TACCCATTTG AACAATCAGC CGATCGACTC GGCGAAGACC
TTTGCCGAAG TGGCCGGTGC GTTGCCAAAA GGCCGGTCGG TATCCATGAG GGTGCTGCGC
CAGGGGCGTG CCAGTTTCAT TACTTTCAAA CTGGCCGAGT GA
 
Protein sequence
MSKVGFKSFA SVLAGALLLG QSLFVQAQLP EFTSLVEEAS PAVVNISTRQ KLPDRSTVQG 
LPDLEGLPPL FREFLERSIP QLPRTPDNGR QREAHSLGSG FIISPDGYVL TNNHVVADAD
EIIVRLSDRS ELEAELVGAD PLTDVALLKV KGSNLPTVKL GRTDQLRVGE WVLAIGSPFG
FDHSVTAGII SATGRSLPNE SYVPFIQTDV AINPGNSGGP LFDLDGRVIG INSQIFTRSG
GFMGLSFAIP IEVAMGVADQ LKATGKVARG WLGVIIQEVN KDLAESFGLD RPAGALVAQV
LEDGPADKGG LQVGDVILSL DGHPIVMSAD LPHLVGGLKP GAAANLEVVR DGKRRNIAIT
VGALPEEGNG VQPSIAGTEQ SSNRLGVTVT ELTAEQKKSL DLKGGVVIRE VLNGPAALIG
LRPGDVVTHL NNQPIDSAKT FAEVAGALPK GRSVSMRVLR QGRASFITFK LAE