| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_13730 |
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| Symbol | mucD |
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| ID | 7760311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1334230 |
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| End bp | 1335651 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643804268 |
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| Product | HtrA serine protease |
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| Protein accession | YP_002798567 |
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| Protein GI | 226943494 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGG TTGGTTTTAA GTCCTTCGCC TCCGTTTTGG CAGGTGCCCT GCTGCTCGGG
CAGTCGCTCT TCGTGCAGGC GCAATTACCG GAGTTCACCT CGCTGGTGGA GGAAGCCTCG
CCGGCGGTAG TCAATATCAG TACCCGGCAA AAGCTTCCCG ATCGCTCCAC GGTTCAGGGA
TTGCCTGATC TCGAGGGGCT TCCGCCGCTT TTCAGGGAGT TCCTGGAGCG CAGCATTCCG
CAACTTCCGC GTACTCCGGA TAACGGGCGG CAGCGTGAGG CGCACTCCCT GGGCTCGGGT
TTCATCATTT CTCCAGATGG CTATGTTCTA ACCAACAACC ATGTGGTGGC CGATGCCGAT
GAAATCATCG TGCGTTTGTC CGATCGCAGT GAGCTCGAGG CCGAGCTGGT CGGGGCCGAT
CCTCTTACCG ATGTAGCTTT GTTGAAGGTC AAGGGTTCGA ATCTCCCCAC AGTCAAACTG
GGACGTACCG ACCAATTGAG AGTCGGGGAA TGGGTTCTGG CCATCGGTTC CCCTTTCGGT
TTCGATCATT CCGTGACTGC GGGCATCATC AGTGCCACGG GGCGAAGCCT GCCGAACGAG
AGTTACGTTC CTTTCATCCA GACCGATGTG GCCATCAATC CCGGTAACTC CGGCGGGCCG
CTCTTCGATC TGGATGGACG GGTCATAGGC ATCAACTCCC AGATATTCAC CCGGTCGGGG
GGCTTCATGG GCTTGTCTTT CGCGATTCCC ATCGAGGTTG CCATGGGCGT GGCCGATCAG
TTGAAGGCCA CTGGCAAGGT TGCTCGCGGT TGGTTGGGAG TAATCATTCA GGAAGTCAAC
AAGGATCTGG CTGAGTCCTT TGGTCTGGAT CGGCCGGCCG GAGCGTTGGT CGCCCAGGTC
TTGGAGGATG GACCGGCGGA CAAGGGCGGT TTGCAGGTCG GCGATGTCAT TCTCAGCCTA
GATGGTCATC CTATTGTGAT GTCGGCCGAT CTGCCGCATC TGGTTGGGGG GCTCAAACCC
GGGGCTGCAG CCAATCTCGA GGTGGTGCGT GACGGCAAGC GGAGGAACAT CGCTATCACT
GTCGGGGCCT TGCCGGAGGA GGGGAATGGG GTTCAGCCGA GTATCGCGGG CACGGAACAG
AGCAGCAATC GCCTTGGAGT GACGGTCACC GAACTGACGG CTGAGCAGAA GAAATCCCTT
GATCTCAAGG GTGGTGTGGT CATTCGCGAA GTGCTGAACG GTCCGGCCGC ATTGATCGGA
CTGCGGCCTG GCGATGTAGT TACCCATTTG AACAATCAGC CGATCGACTC GGCGAAGACC
TTTGCCGAAG TGGCCGGTGC GTTGCCAAAA GGCCGGTCGG TATCCATGAG GGTGCTGCGC
CAGGGGCGTG CCAGTTTCAT TACTTTCAAA CTGGCCGAGT GA
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| Protein sequence | MSKVGFKSFA SVLAGALLLG QSLFVQAQLP EFTSLVEEAS PAVVNISTRQ KLPDRSTVQG
LPDLEGLPPL FREFLERSIP QLPRTPDNGR QREAHSLGSG FIISPDGYVL TNNHVVADAD
EIIVRLSDRS ELEAELVGAD PLTDVALLKV KGSNLPTVKL GRTDQLRVGE WVLAIGSPFG
FDHSVTAGII SATGRSLPNE SYVPFIQTDV AINPGNSGGP LFDLDGRVIG INSQIFTRSG
GFMGLSFAIP IEVAMGVADQ LKATGKVARG WLGVIIQEVN KDLAESFGLD RPAGALVAQV
LEDGPADKGG LQVGDVILSL DGHPIVMSAD LPHLVGGLKP GAAANLEVVR DGKRRNIAIT
VGALPEEGNG VQPSIAGTEQ SSNRLGVTVT ELTAEQKKSL DLKGGVVIRE VLNGPAALIG
LRPGDVVTHL NNQPIDSAKT FAEVAGALPK GRSVSMRVLR QGRASFITFK LAE
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