Gene Avin_13570 details

Gene Information

• Locus tag: Avin_13570
• ID: 7760298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1324038
• End bp: 1324679
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643804257
• Product: transposase
• Protein accession: YP_002798556
• Protein GI: 226943483
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3335] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGTTT CTCGACCGGC ACGCCATGAC GTTCAAAAAA AGACCGCGCA TGCAGCCGAG 
CAGCAACGGC CGGACGTCCA GGCAGCCCGA CAGGGATGGA TCGAGGAGCA GTCCGGTTTC 
GATTGGCGCA AGCTGATCTT CGTCGACGAA ACCGCCGCTT CGACGAACCT GGCCCGCCTG 
CGAGGCTGGG CCCCTCGCGG CGAGCGCTGC CGGGCCGCGA TCCCCCACGG CCACTGGAAA 
ACCACGACCT TTACCGCCGG CCTGCGGCTG GATGGCCTGA GCGCGCCGCT GGTGCTCGAC 
GGCGCCATGA ACGGCCCGGT CTTCCTGGCC TATGTCGGGC AGGTTCTGGT ACCCGAGCTG 
ACGCCCGGCG ATATCGTGGT GATGGACAAC CTGCCGGCCC ACAAGGTGGC GGGGGTACGC 
CAGGCCATCG AAGGCGCAGG AGCCACACTG CGCTACTTGC CACCCTATAG CCCCGACCTG 
AACCTGATCG AGATGGCCTT CTCCAAGCTC AAGGCACTGC TGAGAAAGGC GGCGGCGCGG 
ACCGTGCCGC AGCTGTGGCA GAGCATTGGC GAGGCGATTG CGCAGTTCTC GGCGCAGGAC 
TGCAGGCACT ACTTCGAGGC AGCCGGATAT GAATCAGGAT AA 

 

Protein sequence

MDVSRPARHD VQKKTAHAAE QQRPDVQAAR QGWIEEQSGF DWRKLIFVDE TAASTNLARL 
RGWAPRGERC RAAIPHGHWK TTTFTAGLRL DGLSAPLVLD GAMNGPVFLA YVGQVLVPEL 
TPGDIVVMDN LPAHKVAGVR QAIEGAGATL RYLPPYSPDL NLIEMAFSKL KALLRKAAAR 
TVPQLWQSIG EAIAQFSAQD CRHYFEAAGY ESG