Gene Avin_13480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_13480 
SymbolgroEL 
ID7760290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1312587 
End bp1314227 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content63% 
IMG OID643804250 
Productchaperonin GroEL 
Protein accessionYP_002798549 
Protein GI226943476 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.434878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAA AAGAAGTCAA GTTCGGTGAT TCCGCCCGCA AGAAAATGCT GGTAGGCGTG 
AACGTCCTGG CCGATGCCGT CAAGGCCACT CTCGGCCCGA AAGGCCGCAA CGTGGTCCTG
GACAAGAGCT TCGGCGCACC GACCATCACC AAGGATGGCG TATCCGTGGC CAAGGAAATC
GAGCTCAAAG ACAAGTTCGA GAACATGGGC GCCCAACTGG TGAAGGACGT GGCCTCCAAG
GCCAACGACG AAGCCGGTGA CGGTACCACC ACCGCTACCG TACTGGCCCA GGCCATCGTC
AACGAAGGCC TGAAGGCCGT TGCCGCAGGC ATGAACCCGA TGGATCTGAA GCGCGGCATC
GATAAGGCGA CCATCGCCAT CGTTGCGGAG CTGAAGTCGC TGGCCAAGCC GTGCTCCGAC
TCCAAGGCGA TCGCCCAGGT AGGCACCATT TCCGCCAACT CCGACGAGTC CATCGGTAAC
ATCATCGCCG AGGCCATGAA CAAGGTCGGC AAGGAAGGCG TGATCACCGT CGAGGAAGGC
TCGGGCCTGG AGAACGAGTT GTCCGTCGTC GAAGGCATGC AGTTCGATCG TGGCTACCTG
TCTCCGTACT TCATCAACAA GCCCGACACC ATGGTTGCCG AACTGGACAA CCCGCTGCTG
CTGCTGGTCG ACAAGAAGAT CTCCAACATC CGCGAGCTGC TGCCGGTGCT GGAAGCCGTG
GCCAAGTCCG GCCGTCCGCT GCTGATCGTC GCCGAAGACG TCGAAGGCGA AGCCCTGGCC
ACCCTGGTGG TCAACAACAT GCGTGGCATC GTCAAGGTCG CTGCCGTGAA GGCTCCGGGC
TTCGGCGATC GTCGCAAGGC CATGCTGCAG GACATCGCCA TCCTGACCGG CGCCACCGTG
ATCTCCGAGG AAGTCGGCCT GAGCTTGGAA AGCGCCACTC TGGAGCATCT GGGTAACGCC
AAGCGCGTCG TGCTGAACAA GGAAAACACC ACCATCATCG ACGGTGCCGG TGCCCAGGCC
GACATCGAGG CTCGTGTGGC GCAGATCCGC AAGCAGATCG AGGAAACCTC CTCCGATTAC
GATCGCGAGA AGCTGCAGGA GCGTCTGGCC AAGCTGGCCG GTGGCGTGGC CGTGATCAAG
GTCGGTGCCG CCACCGAGGT CGAGATGAAG GAGAAAAAGG CCCGCGTCGA AGACGCCCTG
CATGCGACCC GTGCGGCAGT GGAGGAGGGC GTGGTTCCCG GCGGCGGCGT GGCTCTGGTG
CGTGCCCTGC AGGCCATCGA GGGTCTGAAG GGCGACAACG AAGACCAGAA CGTCGGCATC
GCCCTGCTAC GTCGTGCCGT CGAAGCACCG CTGCGTCAGA TCGTCGCCAA TGCCGGTGAT
GAGCCGAGCG TGGTGGTCGA CAAGGTCAAG CAGGGCTCTG GCAACTTCGG CTTCAACGCT
GCCAGCGGCG TATACGGCGA CATGATCGAG ATGGGCATCC TCGATCCGGC CAAGGTTACC
CGCTCCGCGC TGCAGGCGGC TTCTTCGATC GGTGGACTGA TGATCACCAC CGAGGCCATG
GTCGCCGACA TTGTCGAAGA CAAGGCAGCT CCAGCCATGC CGGACATGGG CGGTATGGGT
GGCATGGGCG GCATGATGTA G
 
Protein sequence
MAAKEVKFGD SARKKMLVGV NVLADAVKAT LGPKGRNVVL DKSFGAPTIT KDGVSVAKEI 
ELKDKFENMG AQLVKDVASK ANDEAGDGTT TATVLAQAIV NEGLKAVAAG MNPMDLKRGI
DKATIAIVAE LKSLAKPCSD SKAIAQVGTI SANSDESIGN IIAEAMNKVG KEGVITVEEG
SGLENELSVV EGMQFDRGYL SPYFINKPDT MVAELDNPLL LLVDKKISNI RELLPVLEAV
AKSGRPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAILTGATV
ISEEVGLSLE SATLEHLGNA KRVVLNKENT TIIDGAGAQA DIEARVAQIR KQIEETSSDY
DREKLQERLA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RALQAIEGLK GDNEDQNVGI ALLRRAVEAP LRQIVANAGD EPSVVVDKVK QGSGNFGFNA
ASGVYGDMIE MGILDPAKVT RSALQAASSI GGLMITTEAM VADIVEDKAA PAMPDMGGMG
GMGGMM