Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_13120 |
Symbol | gmhA |
ID | 7760254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1274469 |
End bp | 1275062 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643804214 |
Product | phosphoheptose isomerase |
Protein accession | YP_002798513 |
Protein GI | 226943440 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATGC ACGCCCGCAT CAGCCAGCTC TTTCAGGCCA GCATTGAAAC CAAGCAGCAG GCCATGGAGG TCATCCTCCC CCATATCGTC CAAGCCAGCG AACTCATGGT TCAGGCCTTG CTCAACGAAG GCAAGATCCT TTCTTGCGGC AATGGCGGTT CAGCCGGAGA TGCACAACAC TTCTCGTCGG AACTGCTCAA CCGCTTCGAG CGCGAACGCC CCAGCCTGCC GGCCATCGCA CTGACCACCG ACAGTTCGAC GCTCACTTCG ATCGCCAACG ATTACAGCTA CAACGAAGTT TTTTCCAAGC AGATCCGCGC CCTGGGTCAA CCCGGCGACG TTCTGTTGGC CATTTCCACC AGCGGCAACT CCGCCAATGT GATTCAAGCC ATCCAGGCCG CTCATGACAG GGAAATGCAG GTAGTTGCTT TGACTGGCCG CGATGGGGGC GGCATGGCCG CATTACTGCT CCCCGAGGAC ATCGAAATCC GAATACCAGC CAAGGTTACG GCCAGGATTC AGGAAGTGCA CCTGCTGGTC ATCCACTGTT TGTGCGATTT AATCGACAAT CAACTGTTTG GAAGCGAAGA ATGA
|
Protein sequence | MDMHARISQL FQASIETKQQ AMEVILPHIV QASELMVQAL LNEGKILSCG NGGSAGDAQH FSSELLNRFE RERPSLPAIA LTTDSSTLTS IANDYSYNEV FSKQIRALGQ PGDVLLAIST SGNSANVIQA IQAAHDREMQ VVALTGRDGG GMAALLLPED IEIRIPAKVT ARIQEVHLLV IHCLCDLIDN QLFGSEE
|
| |