Gene Avin_13080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_13080 
SymbolpetC 
ID7760250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1271995 
End bp1272774 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content56% 
IMG OID643804210 
Productubiquinol--cytochrome c reductase, cytochrome c1 
Protein accessionYP_002798509 
Protein GI226943436 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC AATTTGCTGC GTTAATTCTT GCAATCCTGC CGGCCTTTTC CTTTGCTGCG 
GGGACCGCTG TCGAACTGGA CAAAGTCGAC GTTGATCTGG CTGATAAGGC TGCCATGCAG
GATGGCCTGC GGACCTTCGC CAACTATTGC ATGGGTTGTC ATGGCGCCCG TTTCCAGCGC
TATGAGCGGG TAGCCAGGGA CTTGGGCATT CCGGAAGAGG TAATGCTGGA AAACATCATC
TTCACCGGTG CCAAGATTGG CGACCACATG AAGATCGGTA TGCGCCCGGA GGATGCCAAG
GTCTGGTTTG GTGCGGCGCC ACCGGATCTG ACACTGGTCG CCCGTGTGCG TGGCAACGAC
TGGCTGTATA GCTATCTGCG CAGCTTCTAT GAAGATCCGT CGCGTCCTCT GGGAGTGAAC
AACACGGTTT TTCCAAACGT TGGCATGCCT AACGTGCTGG CTGGCCTGCA GGGGCGTCAG
GTCTTCGGTT GCAAGCAGGT TCAGGTGGTT GAGGATGGCA AGAAGCAGTA TGACCCGCTC
ACGGGGGCGG AGATTACCCA TGAGGCTTGC GATCAACTGA CCATTCTGCC GAAAACCGGC
ACACTGACCC CCGAAGAGTT CGACGAGAAG GTGAAGAATC TGGTGACCTT CCTTGCCTAT
TCGGCCAACC CGGTCAAGCT GGAAAGCCAG CGAGTCGGTG GTTACGTGCT TCTGTTCCTG
GCGGTCTTTT TCGTGTTCGC CTATCTGCTC AAGCGCGAAT ACTGGAAAGA CGTGCACTGA
 
Protein sequence
MKKQFAALIL AILPAFSFAA GTAVELDKVD VDLADKAAMQ DGLRTFANYC MGCHGARFQR 
YERVARDLGI PEEVMLENII FTGAKIGDHM KIGMRPEDAK VWFGAAPPDL TLVARVRGND
WLYSYLRSFY EDPSRPLGVN NTVFPNVGMP NVLAGLQGRQ VFGCKQVQVV EDGKKQYDPL
TGAEITHEAC DQLTILPKTG TLTPEEFDEK VKNLVTFLAY SANPVKLESQ RVGGYVLLFL
AVFFVFAYLL KREYWKDVH