| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_13040 |
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| Symbol | rplM |
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| ID | 7760246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1269092 |
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| End bp | 1269520 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643804206 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_002798505 |
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| Protein GI | 226943432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTT TTACTGCGAA ACCGGAAACC GTTAAGCGCG ACTGGTATGT CGTCGACGCT
GCCGGCCAGA CCCTGGGTCG TCTGGCTACT GAGATCGCCA GCCGTCTGCG CGGCAAGCAC
AAGCCTGAAT ACACTCCGCA TGTGGATACC GGTGATTACA TCGTCGTGAT CAATGCCGAG
CAAGTACGGG TTACCGGTGC CAAGAGCAGC GACAAGATCT ACTATTCCCA TTCCGGTTTT
CCGGGCGGTA TCAAATCCAT CAGCTTCGAG AAGTTGATTG CCAAGGCGCC CGAGCGCGTG
ATCGAGACTG CGGTCAAGGG CATGCTGCCG AAGAATCCGC TGGGTCGCGA CATGTATCGC
AAGCTGAAGG TGTACAAGGG TGCTGTTCAC CCGCATACCG CTCAGCAGCC TCAAGAACTG
AAGATTTAA
|
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| Protein sequence | MKTFTAKPET VKRDWYVVDA AGQTLGRLAT EIASRLRGKH KPEYTPHVDT GDYIVVINAE
QVRVTGAKSS DKIYYSHSGF PGGIKSISFE KLIAKAPERV IETAVKGMLP KNPLGRDMYR
KLKVYKGAVH PHTAQQPQEL KI
|
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