Gene Avin_12870 details

Gene Information

• Locus tag: Avin_12870
• ID: 7760229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1252294
• End bp: 1252764
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643804189
• Product: organic solvent tolerance ABC efflux transporter, substrate binding protein
• Protein accession: YP_002798488
• Protein GI: 226943415
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACCC GCACCCTGGA AACCGGTGTT GGCCTGTTCA TCCTGGCAGG TATGCTGGCC 
CTCCTGCTGC TGGCACTGCG TGTCAGTGGC CTGACGGTCA GTACCAATGG TGATACCTAC 
AGGCTTTATG CGTATTTCGA TAACATCGCC GGCCTGACGA ACAGGGCCAA GGTGACCATG 
GCCGGCGTTG CCATCGGCAA GGTCACGGCC ATCGATCTGG ATCGCAACAG TTACACCGGT 
CGCGTGACCA TGGAGCTGGA AAAACGTGTC GACAATCTGC CGACCGACTC CACGGCGTCT 
ATTCTGACCG CTGGCCTGCT GGGCGAGAAG TACGTTGGCA TCAGTGTTGG AGGCGAAGAG 
GAAGTGCTGA AGGATGGCGA CTCGATCAGG GATACCCAGT CGGCACTGGT GCTCGAGGAT 
CTGATCGGCA AGTTCCTGAT GAACTCCGTC AACAAGGCCA AAGAAGAATA G 

 

Protein sequence

MQTRTLETGV GLFILAGMLA LLLLALRVSG LTVSTNGDTY RLYAYFDNIA GLTNRAKVTM 
AGVAIGKVTA IDLDRNSYTG RVTMELEKRV DNLPTDSTAS ILTAGLLGEK YVGISVGGEE 
EVLKDGDSIR DTQSALVLED LIGKFLMNSV NKAKEE