Gene Avin_12860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12860 
Symbol 
ID7760228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1251497 
End bp1252294 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content61% 
IMG OID643804188 
Productorganic solvent tolerance ABC efflux transporter, permease component 
Protein accessionYP_002798487 
Protein GI226943414 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGA GATCCCTCTT CGAGCAGGTC GGCCTGCTCG GCCGCGCTGC GATCGATGTG 
ATCGAAGCGC TGGGGCGTTC CGCGCTGTTC CTGATGCATG CCACGTTCGG CCGGAGCGGG
GCCGGGGGCG GCTTCCAGTT GCTGGTCAAG CAGATTCATT CGATTGGTGT GCTGTCGTTG
CCGATCATTG TCGTCTCCGG TCTCTTCATC GGCATGGTGC TGGCGCTACA GGGCTATAAC
ATCCTGGTCA GCTATGGCTC GGAGCAGGCG GTCGGGCAGT TGGTCGCCCT GACCCTGCTG
CGCGAGCTGG GGCCGGTTGT CACCGGGTTG CTGTTCGCCG GACGTGCCGG TTCGGCGCTC
ACCGCGGAAA TCGGCAACAT GAAGTCCACC GAGCAGCTTT CCAGTCTGGA AATGATCGGT
GTCGATCCGC TCAAGTACAT CATCGCACCG CGCCTGTGGG CCGGTTTCCT TTCCATGCCG
TTGCTGGCCG CGATCTTCAA TGTGGTCGGC ATCTGGGGGG CGGCCATGGT CGCGGTGGAC
TGGCTGGGCG TCTACGACGG CTCGTTCTGG GCCAGTATGC AAAGCAGCGT GGATCTGTAC
GACGACGTGG TCAACGGCGC GATCAAGAGC ATTGCCTTTG CCTTTGTGGT GACCTGGATT
GCCGTATTCC AAGGTTACGA CTGCGAACCG ACCTCGGAGG GAATCGGTCG CGCTACTACA
AGAACAGTGG TCTATGCCTC GCTGGCCGTG CTGGGACTGG ACTTCATTCT GACAGCCTTG
ATGTTTGGAG ATAACTGA
 
Protein sequence
MHKRSLFEQV GLLGRAAIDV IEALGRSALF LMHATFGRSG AGGGFQLLVK QIHSIGVLSL 
PIIVVSGLFI GMVLALQGYN ILVSYGSEQA VGQLVALTLL RELGPVVTGL LFAGRAGSAL
TAEIGNMKST EQLSSLEMIG VDPLKYIIAP RLWAGFLSMP LLAAIFNVVG IWGAAMVAVD
WLGVYDGSFW ASMQSSVDLY DDVVNGAIKS IAFAFVVTWI AVFQGYDCEP TSEGIGRATT
RTVVYASLAV LGLDFILTAL MFGDN