Gene Avin_12850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12850 
Symbol 
ID7760227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1250688 
End bp1251497 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content59% 
IMG OID643804187 
Productorganic solvent tolerance ABC efflux transporter, ATP binding component 
Protein accessionYP_002798486 
Protein GI226943413 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACT CAAACGACTA CGCGGTCACG CTGAAGGGCG TTTCCTTCAA GCGAGGCTCG 
CGCAGCATCT TCAACAATGT AGATATCCGC ATACCGCGTG GCAAAGTCAC CGGAATCATG
GGCCCTTCGG GCTGTGGCAA GACTACTCTG TTGCGTCTGA TAGCTGCCCA GTTGAGGCCG
GAAAGCGGCG AAGTCTGGGT CAATGGGCAT AATCTCCCGC AGCTTTCTCG CAGCGAATTG
TTCGAGATGC GCAAGGAAAT GGGCGTGCTG TTCCAGAGCG GGGCCCTTTT CACCGATCTG
GATGTGTTCG AGAACGTTGC CTTTCCGCTG CGGGTCCATA CCAAGCTGCC GGATGAAATG
GTCCGTGACA TCGTCCTGAT GAAACTGCAG GCGGTCGGAT TGCGTGGCGC CATAGATCTG
ATGCCCGATG AGCTTTCCGG AGGTATGAAG CGCCGGGTGG CGCTGGCCAG GGCGATTGCC
CTCGATCCCC AGATCCTCAT GTACGACGAA CCCTTCGTCG GCCAGGATCC GATCGCCATG
GGTGTGCTGG TCCGCCTGAT TCGCCTGCTC AATGATGCCC TTGGCATTAC CAGTATCGTG
GTTTCCCACG ATCTGGCCGA AACGGCCAGC ATCGCCGATT ACCTCTACGT GGTAGGCGAT
GGGCAGGTTC TGGGGGAGGG GACTCCCGAG GACTTGATGA ACTCCAAGAA TCCGCGTGTT
ACCCAGTTCA TGAAGGGGCT GCCGGACGGG CCGGTACCCT TCCATTTTCC GGCCCCGGAT
TATCGCAACG ACCTTCTGGG GAGGCGCTGA
 
Protein sequence
MSDSNDYAVT LKGVSFKRGS RSIFNNVDIR IPRGKVTGIM GPSGCGKTTL LRLIAAQLRP 
ESGEVWVNGH NLPQLSRSEL FEMRKEMGVL FQSGALFTDL DVFENVAFPL RVHTKLPDEM
VRDIVLMKLQ AVGLRGAIDL MPDELSGGMK RRVALARAIA LDPQILMYDE PFVGQDPIAM
GVLVRLIRLL NDALGITSIV VSHDLAETAS IADYLYVVGD GQVLGEGTPE DLMNSKNPRV
TQFMKGLPDG PVPFHFPAPD YRNDLLGRR