| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_12830 |
|---|
| Symbol | |
|---|
| ID | 7760225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1248963 |
|---|
| End bp | 1249487 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643804185 |
|---|
| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
|---|
| Protein accession | YP_002798484 |
|---|
| Protein GI | 226943411 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG AACTGCTGCA GCGGGCTCGG GGCATTCGCC TGGCCGTTTT CGATGTCGAC
GGAGTGCTCA CCGACGGGCG TCTGTATTTT CTGGCCGACG GCAGCGAATT CAAGACTTTC
AACACGCTGG ACGGTCATGG CATCAAGATG CTGATCAATT CCGGAGTGCG CACCGCTATC
ATCAGCGGCC GCAGCACCCC GGTTGTCGAG CGCCGTGCCC GGAACCTGGG CATCCAGCAC
CTGTACCAGG GGCGCGAAGA CAAGCTGGCC GTGCTGGATG AGCTGCTTGC CGAACTGAAG
CTGGACCACG GGCAGGTCGC CTACCTCGGT GACGATCTCC CCGACCTGCC GGTCATCCGT
CGTGTCGGCC TGGGCATGGC CGTGGCCAGC GCCGACTCCT TCGTCCGCCA GCATGCCCAC
GGCGTCACCC GGGCGCGCGG CGGCGAAGGT GCGGCCCGTG AATTCTGCGA GCTGATCCTG
CAGGCCCAGG GCAACCTCGA AACCCTCCAG AGCGCTTACC TGTAG
|
|---|
| Protein sequence | MNDELLQRAR GIRLAVFDVD GVLTDGRLYF LADGSEFKTF NTLDGHGIKM LINSGVRTAI
ISGRSTPVVE RRARNLGIQH LYQGREDKLA VLDELLAELK LDHGQVAYLG DDLPDLPVIR
RVGLGMAVAS ADSFVRQHAH GVTRARGGEG AAREFCELIL QAQGNLETLQ SAYL
|
|---|
| |