Gene Avin_12700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12700 
Symbol 
ID7760212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1235100 
End bp1238933 
Gene Length3834 bp 
Protein Length1277 aa 
Translation table11 
GC content70% 
IMG OID643804172 
Producthypothetical protein 
Protein accessionYP_002798471 
Protein GI226943398 
COG category[S] Function unknown 
COG ID[COG3164] Predicted membrane protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02099] conserved hypothetical protein TIGR02099 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGAT CCTCCCGCCT GTTCGCGATC GTCCTGCGTA TCCTGCTCGG GCTCGGTTTC 
CTCGGCCTGA TGCTGTTGGC GCTGAGCGTC AGCCTGGGGC GTCAGTTGGC GCCACTGGTC
GCCGACACGC GCCTCGAAGT GCAGGCGCGG GTCCGCGACG TACTGGACAT GCCGGTCGCC
ATCCGTGCCC TGGAGGGGCG CTGGACCGCC TTGTCGCCAC GCCTGCTGGC GCGTGACGTG
ACGATCGGCG AGGGCGAGGA TGCGCTGCAC CTGGAGCGGG TCCAGGTGCG CCTCGATCTG
CTGCGCACTC TGCTGGCCCG CGAGTTGCGC GTCGCCGCGC TGGAGGTCGA GGGGGTGAGT
TTCACTCTGG CGCAGGATGC CGGTGGACGC TGGACCCTGG AGGGGGCGCC GCAGCGCGGC
CGGCAGCGGC CGTTCAACCC GGACGAGTCC CTGCGCGCGC TCGAGCGGAT CGATCATCTG
TCGCTGCTGG ACAGCCAGGT CACCTTCGCG CCGCACGGGC AGGAGCCTTT CTCTCTCCAG
AACGTCGACC TCACGTTGCG CAGCGACGGC TGGCGGCAGC GTCTCGACGG TCGGCTGATC
CTGCCCGACG GCCAGCCGCT GCAATTGAGC CTGCACGGCC AGTTGGCCGA CGAGGGCTGG
CGGCAGAGTT CCGCCGAACT CTACGTCAGC CTGCCGCAGA GCGATTGGGC GAGCTGGGTG
CCGCGCAGCC TGACCGGCGA CTGGCGGATC GAGCGGCTGC GTGCCGGCGG CGAGTTCTGG
CTGGCCTGGG ACAAGAGCCG CCTGCAGCGC GCGGCGGCCC GCCTGCAGGC GCCCGAGCTG
CGCATCCAGC GCACCGGGCA GGCGCCGGCC GAGGTGCGTG ACCTGGCGCT GAGCGGGCAT
TTTCTGAGCG ATGGCGAAAA TCTCCGCGCC TTGATCGATT CGCTGCAAGC CGACTTCGGC
GAGAGCCGCT GGGCGGGCGT GCAGATCGCG CTCGAGCACC GGACCGCGGC CGATGCCGCC
TCTGCCTGGA CGCTGACCGC CAACCACCTC GACCTGACCC CGCTGACCCC GCTGGTACAG
TCCCTTGCGC CGCTGCCGGA GGCCGCCGAA GGCGCCCTGG AGGCCTTGCG GCCGCGTGGC
AGCCTGCGCA ACCTGCGGCT GGATTACCGT CCCCGGGCCG AGGGAGGCCA GCGTCTCGCC
TATGCGGCCA ATCTTCAGGG CGTGGCCTTC GATGCCTGGC AGGGTGTGCC GGCGGCGAAC
AATGTCAGCG GCAGTGTCAG CGGCGATCTG GCCGGCGGCG AGCTGCGCTT CAACGGCGAG
GACCTCGCCC TGCATCTCGC GCGCCTGTTC CCCCGTCCCT GGCACTACCG GCATGCGGCC
GGTCAGTTGT TCTGGCGGAT CGACGAGCAG AGCGTGACCC TGCGCAGCCC CTACGTGCAG
ACGGACGGCG AGGAGGGACG CGCCAGCGGG GACTTCCTGA TCCGCCTGCG CCGCGATCCG
GCGGAGGAGG ACTACATGGA TCTGCGCGTC GGTCTGCGCG ATGGCGATGC CCGTTACGCC
GAGAAATACC TGCCGACCCT TTCGCCCGGG CTGTCGCCGC AACTGGCCGA CTGGCTGAAG
ACCGCGATCC GTGCCGGCCG CGTGGACGAA GGCTATTTCC TCTATCAGGG CTCGCTGAAC
AAGGGCGCCG AGGATGCGGC GCGCAGTCTC GCTCTGTTCT TCAAGGTGCG CGATGTCGAG
CTGGCCTATC AGCCGGGCTG GCCGGCGTTG CGCGAGGCGC AGGGCGAGGT GTTCGTCGAG
GACAGCGGCG TGCGCGTGCG CCTGGATAGC GGGCGGGTGC TGGACACCCG GCTGAGTTCG
GCCATGGCCG AGATTCCTTC GGCCAAGGGC GGGGTGCCGC ACTTGCAGGT GGAAGGCGAG
CTGGAAGGCA GTGTCGGCGA CGGCCTGCGC ATTCTCCGGG AGGCGCCGCT GGAGACCGCG
GAAATCTTCG CCGGCTGGTC GGGCGAGGGG CCGCTGCGGG GGCGGCTCAC GCTGGACATC
CCGTTGCGCC GGGAGGTGGA TCGGCCACCG CGAGTGGTGG CGGAGTTGCA CACCGAGGGC
GCGCGCCTGC AGATGGCCCA GCCGAACCTG CAACTGACCC GCCTGCAAGG TGCCTTCAGC
TACGATACGG CGAAGGGGCT CAGTGCGCCG GACATCCGCG CCCAGGCGTT CGGCCGGCCG
GTACGCGGCC GGGCTCTCGC CGAGGGGCGC AAGGGCAAGG CGCGGACCCG TATCCAGGCC
AACGGTCAGG TATCCGCGGC GGCGCTTGCC AAGTGGTTGC AGGTAAGCCA GCGCCTGCCG
CTGTCCGGCG AGCTACCTTA TCGCCTCGAG TTGCTGCTGG ACGGCGCGAA CAGTTGGCTA
CAGGCCGATT CCACCTTGCG CGGCCTGCGC ATCGATCTGC CGGAGCCGCT GGGCAAGCCG
GCCGGAGAGG CCCGCAATAC GCGTTGGCGC ATGACCCTGG ATGGCGCCGA GCGCCGTTAC
CGGCTGGATT ACGCCGATCA GGCCAGTCTG GCTCTGGCCG CGCCGTCCGG ACGCTTCGGC
GAGGGGCGCG GCGAACTGCT TCTCGGCAGC GGCAAAGCTC GGTTGCCGAG GGCACGTGGC
CTCTGGCTGC GCGGTCGGAT TCCCACCCTG GACTGGGACG CCTGGCAGGT AGCTCTGGCC
CCTCTGGCCG CCCAAGGCGG TGCGCAGGCC GGCCTGCTGC GTGGCGCCGA ACTGGAGATC
GGTCGTTTCC AGGGGCTCGG TGTCCACCTG GACTCGCTCG GCGCCTCGCT GACATCCGGC
CGGGCCGGCT GGAACCTGCA ACTGGAAAGC CCGCAGGTTC AGGGGCGCAT CGCCATTCCG
ACGACTTCCC AGGCGCCGAT CGTCGTCGAT CTGTCGCATC TGCAACTACC GGCCAGTGTG
GCCGGATCTA GCGGTGCGCC ATCCGGCGCG TCGGCCGACG ATTCCCTGCA GGCGGTCGAC
CCGCGGAAGA TTCCGGCGCT GGATGTGCGC ATCGCCCGTC TGCAACAGGG CGCCGAGCCG
CTGGGGGCCT GGTCGTTGAA GGCCCGGCCG CGTCCCGACG GCGTGCAGTT CAGCGACCTG
GATCTGGACC TCAAGGGCTT GCGAGTGCTC GGCAGCGCCG GCTGGCAGGG GCGGCCCGGC
GCTACCCGTA GCTGGTTCCG GGGGCGCTTG CAGGGGGGCG ACCTCGCCGA TGTGCTGCTG
GCCTGGGGAT TCGCCCCGAG TGCTTCCAGC GAGACGTTCC GTGTGGACAT CGATGGCAAC
TGGCCGGGCT CTCCGGCGGC CCTGGCCTTG CAGCGCTATA CGGGCAGCTT CGATGTCAGC
CTGAGACGAG GGCAGTTCCA CGAAGTGGAG GGCGCGGCCT CGGCCCTGCG GGCGTTCGGC
CTGCTCAACT TCAATGCCAT TGGCCGTCGG TTGCGCCTGG ATTTCTCCGA CCTGTTCGGC
AAGGGGTTGA GCTACGACCG GGTCAAGGGG CTGGTCGAAG GGCGCGACGG AGTCTTCCGG
ACGGAGATTC CGCTGACCCT GACCGGCCCC TCGAGCAATC TGGAGCTGGA CGGCGTCCTC
AACCTGCCCG GCGATAATAT CGATGCCAAG CTGCTGGTCA CCCTGCCGAT CACCAACAAC
CTGCCGCTCG CCGCCCTGCT GGCCGGCGCA CCGGCGGTCG GCGGGGCCTT GTTCGTCGTG
GACAAGCTGC TCGGCGATCG CGTGGCACGT TTCGCCAGTG TGCAGTATCG CGTCCAGGGT
CCTTGGCGAG AGCCTAGAAT TACCTTCGAC AAGCCTTTCG AGAAGCCGCG CTAG
 
Protein sequence
MPRSSRLFAI VLRILLGLGF LGLMLLALSV SLGRQLAPLV ADTRLEVQAR VRDVLDMPVA 
IRALEGRWTA LSPRLLARDV TIGEGEDALH LERVQVRLDL LRTLLARELR VAALEVEGVS
FTLAQDAGGR WTLEGAPQRG RQRPFNPDES LRALERIDHL SLLDSQVTFA PHGQEPFSLQ
NVDLTLRSDG WRQRLDGRLI LPDGQPLQLS LHGQLADEGW RQSSAELYVS LPQSDWASWV
PRSLTGDWRI ERLRAGGEFW LAWDKSRLQR AAARLQAPEL RIQRTGQAPA EVRDLALSGH
FLSDGENLRA LIDSLQADFG ESRWAGVQIA LEHRTAADAA SAWTLTANHL DLTPLTPLVQ
SLAPLPEAAE GALEALRPRG SLRNLRLDYR PRAEGGQRLA YAANLQGVAF DAWQGVPAAN
NVSGSVSGDL AGGELRFNGE DLALHLARLF PRPWHYRHAA GQLFWRIDEQ SVTLRSPYVQ
TDGEEGRASG DFLIRLRRDP AEEDYMDLRV GLRDGDARYA EKYLPTLSPG LSPQLADWLK
TAIRAGRVDE GYFLYQGSLN KGAEDAARSL ALFFKVRDVE LAYQPGWPAL REAQGEVFVE
DSGVRVRLDS GRVLDTRLSS AMAEIPSAKG GVPHLQVEGE LEGSVGDGLR ILREAPLETA
EIFAGWSGEG PLRGRLTLDI PLRREVDRPP RVVAELHTEG ARLQMAQPNL QLTRLQGAFS
YDTAKGLSAP DIRAQAFGRP VRGRALAEGR KGKARTRIQA NGQVSAAALA KWLQVSQRLP
LSGELPYRLE LLLDGANSWL QADSTLRGLR IDLPEPLGKP AGEARNTRWR MTLDGAERRY
RLDYADQASL ALAAPSGRFG EGRGELLLGS GKARLPRARG LWLRGRIPTL DWDAWQVALA
PLAAQGGAQA GLLRGAELEI GRFQGLGVHL DSLGASLTSG RAGWNLQLES PQVQGRIAIP
TTSQAPIVVD LSHLQLPASV AGSSGAPSGA SADDSLQAVD PRKIPALDVR IARLQQGAEP
LGAWSLKARP RPDGVQFSDL DLDLKGLRVL GSAGWQGRPG ATRSWFRGRL QGGDLADVLL
AWGFAPSASS ETFRVDIDGN WPGSPAALAL QRYTGSFDVS LRRGQFHEVE GAASALRAFG
LLNFNAIGRR LRLDFSDLFG KGLSYDRVKG LVEGRDGVFR TEIPLTLTGP SSNLELDGVL
NLPGDNIDAK LLVTLPITNN LPLAALLAGA PAVGGALFVV DKLLGDRVAR FASVQYRVQG
PWREPRITFD KPFEKPR