Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_12670 |
Symbol | mreD |
ID | 7760209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1232465 |
End bp | 1232944 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643804169 |
Product | Rod shape-determining protein, MreD |
Protein accession | YP_002798468 |
Protein GI | 226943395 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAGC ACAACGGTTG GCTGATCTGG GCCAGCTATC TGGTGGGCCT GTTGCTCAGC GTGGCGCCCA TGCCGGATTT CATGGAACTC GGCCGGCCGT TGTGGCTGGC GATGTTCATC ACCTACTGGA TTCTGTCCGT GCCGCAGCGG GTCAGCCTGA CCCTGACTTG GCTGCTGGGG CTGGCGATGG ATGTGCTCTA TGGGGTTCTG CTCGGACAGC ATGCCCTGAC CCTGACGCTG ATCGCCTTCC TGATGCTGAC CTTGCAGCAG CGTGTCCGCA TGTTTCCGCT CTGGCAACAG AGCCTGGTCC TGCTGGTAGT CTTCGGCCTG GCCCAACTGG TACAGCTCTG GCTCAATGCG CTGGCCGGCA ATCGCCCGCC GACCCTGGTC TTCTTGCTGC CGGCTCTGGT CAGCGCCCTG CTCTGGCCCT GGGTGTTCAC CGCTCTGCGC AGTCTTCGAC TGCGCTTCAA TGTCAATTGA
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Protein sequence | MGEHNGWLIW ASYLVGLLLS VAPMPDFMEL GRPLWLAMFI TYWILSVPQR VSLTLTWLLG LAMDVLYGVL LGQHALTLTL IAFLMLTLQQ RVRMFPLWQQ SLVLLVVFGL AQLVQLWLNA LAGNRPPTLV FLLPALVSAL LWPWVFTALR SLRLRFNVN
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