Gene Avin_12670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12670 
SymbolmreD 
ID7760209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1232465 
End bp1232944 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID643804169 
ProductRod shape-determining protein, MreD 
Protein accessionYP_002798468 
Protein GI226943395 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGC ACAACGGTTG GCTGATCTGG GCCAGCTATC TGGTGGGCCT GTTGCTCAGC 
GTGGCGCCCA TGCCGGATTT CATGGAACTC GGCCGGCCGT TGTGGCTGGC GATGTTCATC
ACCTACTGGA TTCTGTCCGT GCCGCAGCGG GTCAGCCTGA CCCTGACTTG GCTGCTGGGG
CTGGCGATGG ATGTGCTCTA TGGGGTTCTG CTCGGACAGC ATGCCCTGAC CCTGACGCTG
ATCGCCTTCC TGATGCTGAC CTTGCAGCAG CGTGTCCGCA TGTTTCCGCT CTGGCAACAG
AGCCTGGTCC TGCTGGTAGT CTTCGGCCTG GCCCAACTGG TACAGCTCTG GCTCAATGCG
CTGGCCGGCA ATCGCCCGCC GACCCTGGTC TTCTTGCTGC CGGCTCTGGT CAGCGCCCTG
CTCTGGCCCT GGGTGTTCAC CGCTCTGCGC AGTCTTCGAC TGCGCTTCAA TGTCAATTGA
 
Protein sequence
MGEHNGWLIW ASYLVGLLLS VAPMPDFMEL GRPLWLAMFI TYWILSVPQR VSLTLTWLLG 
LAMDVLYGVL LGQHALTLTL IAFLMLTLQQ RVRMFPLWQQ SLVLLVVFGL AQLVQLWLNA
LAGNRPPTLV FLLPALVSAL LWPWVFTALR SLRLRFNVN