| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_12600 |
|---|
| Symbol | |
|---|
| ID | 7760203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1226410 |
|---|
| End bp | 1226781 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643804163 |
|---|
| Product | Rare lipoprotein A, RplA |
|---|
| Protein accession | YP_002798462 |
|---|
| Protein GI | 226943389 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.817198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGAA CATTGCCACT CGCCCTCCTC CTCGCCCTGC TCGCCGGCTA CCCTTCGGAG
CGGCTCGAAG CCGCCCGCTA CAGCGCCGAG GGCATGGCCT CCTACTATGC CAGCCACCAC
CACGGCAAGC GCACCGCCAG TGGCGAGCCC GTGGATCGCA ACACCCTCAC GGCCGCCCAC
CGCACCCTGC CGCTCGGCAG CCGGGTGCGG GTGACCAGCC TGAGTACCCG CCGCAGCGTG
GTGGTGCGCA TCAACGACCG CGGCCCCCAC ACCCACGGAC GGATCATCGA CCTGTCCTAC
AAGGCCGCCC GGCAGTTGGA GATACTGCAT GCCGGCGTGG CCCTGGTGCG TCTGGAACTG
CTCGACAACT GA
|
|---|
| Protein sequence | MLRTLPLALL LALLAGYPSE RLEAARYSAE GMASYYASHH HGKRTASGEP VDRNTLTAAH
RTLPLGSRVR VTSLSTRRSV VVRINDRGPH THGRIIDLSY KAARQLEILH AGVALVRLEL
LDN
|
|---|
| |