Gene Avin_12530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12530 
Symbol 
ID7760196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp1220137 
End bp1220847 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content71% 
IMG OID643804156 
Producthypothetical protein 
Protein accessionYP_002798455 
Protein GI226943382 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.026062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGCC GTCTTCGCCC CGCCATTCCC CTCGTCCTCG CCGCTCTGGC CAGCCTGCCG 
GCACTGGCCG AGGACAGTTC CCGCTACAAC CGAATCTCCC TGCACGCCGA GGCGAGCCGG 
GAGATCGCCC ACGACCTGAT GCGGGTGACC CTCTACGCCG AAGCCCAGCA CAAGGACCCC 
GGCCAGTTGG CCGGCGACAT CACCCGCACC CTCAACGGCG CGGTGGAGCG CGCACGCCAG 
GTGGCGGGGG TGAAGGTCAG CCTCGGCAAC CGCAACAGCT ATCCGGTCTA CGAAGACCAG 
GGCCGGCGGA TCGTCGCCTG GCGCGAGCGC GCCGAGCTGC GCCTGGAAAG CGCCGACTTC 
GCAGCCCTTT CCCAACTGAG CGCCGACCTG CTCGGCGAAC TGAGGATCGC CGACATGCGC 
TTCGCCATCG CCGACGCCAC ACGCAAGAAG GGCGAGGACG CACTGCTGCA GGACGCCGTG 
CAGGCCTTCG GCGAGCGCGC CCAGCTCGCC ACCCGGGCGC TCGGCGGCAG CGGCTACAAG 
CTGGTCAGCC TGAACCTCGG CAGCAGCGGC GTGGTCCCGC CCCCCTTCGC CCGCGTGGCG 
ATGGCGAAGA CCCTGGACCA CGAGGCGGGC GCGCCGGCGC CGGAGATCGA GGCCGGCAGC 
AGCCAGGTGA GCGTCAGCGC CGACGGCGTG ATCGAGGTGC AGATGCCCTG A
 
Protein sequence
MLRRLRPAIP LVLAALASLP ALAEDSSRYN RISLHAEASR EIAHDLMRVT LYAEAQHKDP 
GQLAGDITRT LNGAVERARQ VAGVKVSLGN RNSYPVYEDQ GRRIVAWRER AELRLESADF 
AALSQLSADL LGELRIADMR FAIADATRKK GEDALLQDAV QAFGERAQLA TRALGGSGYK 
LVSLNLGSSG VVPPPFARVA MAKTLDHEAG APAPEIEAGS SQVSVSADGV IEVQMP