Gene Avin_12490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12490 
Symbol 
ID7760192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp1215601 
End bp1216569 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content74% 
IMG OID643804152 
ProductOligopeptide/dipeptide ABC transporter, ATP-binding component 
Protein accessionYP_002798451 
Protein GI226943378 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0971633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC TGGAAATCGA CAACCTCAGC GTGCGCTACG GCCCCGCCGG CGCCCCGCCG 
GTGGTGGACG GCCTCGACCT GCGCCTGGAG GCCGGCGAGG TGCTGGCCAT CGTCGGCGAG 
TCCGGCTCCG GCAAGTCGCA GGCCATGCTC GCCCTGCTCG GCCTGATCGA TCCGCCCGGC 
CGGGTCGCCG CCGGGCGCCT GCGCTTCGCC GGTCACGACC TGCTCGCCCT CGGCGAACGC 
CAGCGGCGCC GGCTGCTCGG CAAGGAGCTG GCGATGGTCT TCCAGGACCC GCTGGCCGCC 
CTCGACCCCA GCTACCGGAT CGGCTTCCAG CTCGAGGAAG TGCTGCGCCA GCACCTCGGC 
CTGCGCGGTC GCGAGGCCCG CCGGCGCGCC CTGGAGCTGC TCGAACAGGT CGAGATCCCG 
GCCGCCGCCA GCCGTCTGGA GGCCTACCCG CATCAGCTCT CCGGCGGCAT GGCCCAGCGC 
GTGGCCATCG CCCTGGCGAT CGCCGCCGGG CCGCGCCTGC TGATCGCCGA CGAACCGACC 
ACCGCCCTCG ACGTGACCAT CCAGGCGCAG ATCCTCGAAC TGCTGCTGAA CCTGCAGCGC 
GAGCGCGGCA TGGCCCTGCT GCTGATCAGC CACGACCTCG CCGTGGTCGC CGAATGCGCC 
AGCCGGGTCT GCGTGATGTA CGCCGGCCAG GCGGTCGAGG TCGGCGAACT GCCCGGCCTG 
TTCGACGCCC CGGCGCATCC CTATACCGAG GCGCTGCTCG CCGCGCTGCC CGAGGCCGGT 
ACCGCGCGCC GCCCGCTGCG CGGCCTGCCG GGAAGCGTCC CCGGCCATCA CGACCGCCCC 
GCCGGCTGCC TGCTGGCGCC GCGCTGCGCC TATGCGCAGG ACGACTGCCG CGCCCTTCGG 
CCAGCGCTGG AAGCCAGGCG CCGAAGCCTG GCGCGCTGCT TCCACCCGCG CAACCAGGAG 
AGTCCATGA
 
Protein sequence
MSLLEIDNLS VRYGPAGAPP VVDGLDLRLE AGEVLAIVGE SGSGKSQAML ALLGLIDPPG 
RVAAGRLRFA GHDLLALGER QRRRLLGKEL AMVFQDPLAA LDPSYRIGFQ LEEVLRQHLG 
LRGREARRRA LELLEQVEIP AAASRLEAYP HQLSGGMAQR VAIALAIAAG PRLLIADEPT 
TALDVTIQAQ ILELLLNLQR ERGMALLLIS HDLAVVAECA SRVCVMYAGQ AVEVGELPGL 
FDAPAHPYTE ALLAALPEAG TARRPLRGLP GSVPGHHDRP AGCLLAPRCA YAQDDCRALR 
PALEARRRSL ARCFHPRNQE SP