Gene Avin_12420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12420 
Symbol 
ID7760185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp1206441 
End bp1207121 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID643804145 
Productputative hydroxylase 
Protein accessionYP_002798444 
Protein GI226943371 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.455137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTAC ACATACCGGG GGTGTTTTCC CGCGACGAGG TCCGGCGCAT TCGCCAGGCA 
CTGGAGCAGG CGCAATGGCT CGACGGCAAG GTGACCGCGG GCTATCAGTC GGCGCGCACC 
AAGCACAACC TGCAGCTCGC CGAGGACGAC CCGCTGGCGC GGGAGATCGC CAGCGCCATG 
CTCGAACGCC TGTGGCAGAA CCCGCAATTC ATGTCCGCCG CGCTGCCGCA CAAGGTCTAT 
CCGCCACTGT TCAACTGCTA TACCGACGGC GGCACCTTCG GCTTCCACAT CGACAACGCC 
GTGCGCCAGG TACGCGGCTC CGCCGAACGG GTACGCACCG ACCTCTCCTC CACCCTGTTC 
TTCAGCGATC CGGACGAATA CGACGGCGGC GAGCTGGTGA TCCAGGACAC CTACGGCTCG 
CAGCGGCTCA AGTTGCCGGC CGGCGATCTG GTGCTCTACC CGGCCACCAG CATCCACCAG 
GTCACGCCGG TCAGCCGCGG CGCGCGCTAC GCTTCCTTCT TCTGGACGCA GAGCCTGGTC 
CGCGAGGACT CCCAGCGCAG CCTGCTGTAC GAGATGGACC AGGCGATCCA GAGCCTGTCG 
CGCGACGTGC CGGATCACCC GGCGCTGGTC CAGTTGACCG GCAACTACCA CAACCTGCTG 
CGCCGCTGGG GCGAAGTGTG A
 
Protein sequence
MLLHIPGVFS RDEVRRIRQA LEQAQWLDGK VTAGYQSART KHNLQLAEDD PLAREIASAM 
LERLWQNPQF MSAALPHKVY PPLFNCYTDG GTFGFHIDNA VRQVRGSAER VRTDLSSTLF 
FSDPDEYDGG ELVIQDTYGS QRLKLPAGDL VLYPATSIHQ VTPVSRGARY ASFFWTQSLV 
REDSQRSLLY EMDQAIQSLS RDVPDHPALV QLTGNYHNLL RRWGEV