Gene Avin_12400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12400 
Symbol 
ID7760183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1204895 
End bp1205494 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID643804143 
ProductPepSY-associated TM helix 
Protein accessionYP_002798442 
Protein GI226943369 
COG category[S] Function unknown 
COG ID[COG3295] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGTA CTTTCTGGCT CGGCACCCTC CGCCAATGGC ACTGGATCAG CTCCGCCCTC 
TGTCTGGCCG GCATGCTGCT GTTCGCCGTC AGCGGCATCA CCCTCAACCA CGCCGCGCAG
ATCGAGAGCA AGCCACGGGT GGAAAACCGC AGCGCCCATT TGCCCGAGGA ACTGCTCGCC
GCGCTGCGCG CCGAGGCGCC GGGAAACGGC CTGCCGGCCG TGCTGCGCGA CTGGTTGGAA
GAAGAACTGG ACATCCGCCT GGACGGACGC GAGGCCGAGT GGACGGAGGA CGAGCTGTAC
GTCGGCCTGC CGCGTCCGGG CGGCGACGCC TGGCTGAGCC TCGACCTGAA GTCGGGCGAA
CTGGAGTACG AGGACACCGA CCGCGGCTGG ATCGCCTACC TGAACGACCT GCACAAGGGC
CGCCACGCGG GCGTCGCCTG GAGCTGGTTC ATCGACATCT TCGCCGCGGC CTGCGTGGTC
TTCAGCCTGA CCGGCCTGCT GCTCCTGCAG CGCCAGGCCG GCGCACGGCC GAGCACCTGG
CCACTGACCG GCCTCGGCCT GCTGCTGCCA CTGTTGATCG CCTTGCTGTT CATCCATTGA
 
Protein sequence
MPRTFWLGTL RQWHWISSAL CLAGMLLFAV SGITLNHAAQ IESKPRVENR SAHLPEELLA 
ALRAEAPGNG LPAVLRDWLE EELDIRLDGR EAEWTEDELY VGLPRPGGDA WLSLDLKSGE
LEYEDTDRGW IAYLNDLHKG RHAGVAWSWF IDIFAAACVV FSLTGLLLLQ RQAGARPSTW
PLTGLGLLLP LLIALLFIH