Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_12320 |
Symbol | speC |
ID | 7760175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1195702 |
End bp | 1196865 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643804135 |
Product | Ornithine decarboxylase |
Protein accession | YP_002798434 |
Protein GI | 226943361 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATCA AGATCGAAGA CTACTACCCA CCCGCCACTT TCCAGCGCAT GAAGGCCTTC GCCGACAAGC AGGAAACGCC CTTCGTCGTC ATCGATACCG AGATCATCGC CAACGCCTAC GAGGAACTGG GCGACTGTTT CCCCTTCGCC CGCATCTACT ACGCGGTGAA GGCCAACCCG GCGGTGGAGA TCATTCGCCT GCTGCGCGAC AAGGGCTCGA ACTTCGACAT CGCCTCGCGC TACGAGCTGG ACAAGGTGAT GGCCGAAGGC GTCGGTCCCG AGCGCGTCAG CTACGGCAAC ACCATCAAGA AGGCCAAGGA CATCCGCTAC TTCTACGAGA AGGGCGTGCG CCTGTTCGCC ACCGATTCCG AGGCCGACCT GCGCAACATC GCCAAGGCCG CGCCGGGCTC CAAGGTCTAT GTGCGCATCC TCACCGAGGG CACCGCGTCG GCCGACTGGC CGCTGTCGCG CAAGTTCGGC TGCCAGCCGG ACATGGCCCT GGACCTGATG ATCCTCGCCC GCCAGTTGGG CCTGGTGCCC TACGGCCTGT CCTTCCACGT GGGCAGCCAG CAGCGCGACA TCGACGTCTG GGACGCGGTG ATCGCCAAGG TCAAGGTGAT CTTCGAGCGC CTCAAGCAGG AAGACGGCAT CGAGCTGAAG ATGATCAACA TGGGCGGCGG TTTCCCGGCC AACTACATCA CCAAGACCAA CAGCCTGCAG ACCTATGCCG AGGAAATCAT CCGCTTCCTC AAGGAAGACT TCGGCGAGGA ACTGCCGGAG ATCATCCTCG AGCCGGGCCG CTCGCTGATC GCCAACGCCG GCATCCTGGT CAGCGAAGTG GTGCTGGTCT CGCGCAAGTC GCGCACCGCC GTGGAGCGCT GGGTGTACAC CGACGTGGGC AAGTTCTCCG GTCTGATCGA GACCATGGAC GAGGCCATCA AGTACCCGAT CTGGACCGAG AAGAAGGGCG AGATGGAAGA GGTGGTGATC GCCGGGCCGA CCTGCGACAG CGCCGACATC ATGTACGAGA ACTACAAGTA CGGCCTGCCG CTCAACCTGG CCAGCGGCGA CCGCCTGTAC TGGCTGTCCA CCGGCGCCTA TACCACCAGT TACAGCGCCG TGGAGTTCAA CGGCTTCCCG CCGCTGAAGT CCTATTATCT ATAA
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Protein sequence | MSIKIEDYYP PATFQRMKAF ADKQETPFVV IDTEIIANAY EELGDCFPFA RIYYAVKANP AVEIIRLLRD KGSNFDIASR YELDKVMAEG VGPERVSYGN TIKKAKDIRY FYEKGVRLFA TDSEADLRNI AKAAPGSKVY VRILTEGTAS ADWPLSRKFG CQPDMALDLM ILARQLGLVP YGLSFHVGSQ QRDIDVWDAV IAKVKVIFER LKQEDGIELK MINMGGGFPA NYITKTNSLQ TYAEEIIRFL KEDFGEELPE IILEPGRSLI ANAGILVSEV VLVSRKSRTA VERWVYTDVG KFSGLIETMD EAIKYPIWTE KKGEMEEVVI AGPTCDSADI MYENYKYGLP LNLASGDRLY WLSTGAYTTS YSAVEFNGFP PLKSYYL
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