| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_12250 |
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| Symbol | prfC |
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| ID | 7760168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1182318 |
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| End bp | 1183901 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643804128 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002798427 |
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| Protein GI | 226943354 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.882878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC AGGCCGCCGA AGTCGCCAAG CGCCGTACCT TCGCCATCAT CTCCCACCCC
GACGCGGGCA AGACCACCAT CACCGAGAAG CTGCTGCTGA TGGGCCAGGC GATCGCCGTG
GCCGGCACGG TGAAGTCGCG CAAGTCCGAC CGCCACGCCA CCTCCGACTG GATGGAGATG
GAGAAGCAGC GCGGCATTTC CATCACCACC TCGGTGATGC AGTTCCCCTA CCGCGAGCAC
ATGATCAACC TGCTCGACAC CCCCGGCCAC GAGGATTTCT CCGAGGACAC CTACCGCACC
CTGACCGCGG TGGACTCGGC GCTGATGGTG CTCGACGGCG GCAAGGGCGT CGAGCCGCGG
ACCATCGCGC TGATGGACGT CTGCCGGCTG CGCGACACGC CGATCGTCAG CTTCATCAAC
AAGCTCGACC GCGACATCCG CGACCCCATC GAACTGCTCG ACGAGATCGA GGCGGTGCTG
AAGATCAAGG CCGCGCCCAT CACCTGGCCG ATCGGCTCCT ACAAGGACTT CAAGGGCGTC
TATCACCTGG CTGCGGACAG GATCTTCGTC TACGTGCCGG GCCACGGCCA CGAACGCATC
GAGGTGCCGG TGATCCAGGG GCTGGATTCG GCCGAGGCGC GCGAGCACCT GGGCGATCTC
TACGACGGCT TCGTCGAGCA GCTTGAGCTA GTGAAGGGCG CCTGCCACGA ATTCGACCGG
GACGCCTTCC TCGAGGGCGA GATGACCCCG GTGTTCTTCG GCACCGCGCT CGGCAACTTC
GGCGTCGACC AGGTGCTCGA CTGCATCGTC GACTGGGCGC CGCAGCCGCT GTCGCGCGCC
GCCCACGAGC GGGTGGTGGA GCCGACCGAG GAGAAGTTCA CCGGCTTCGT GTTCAAGATC
CAGGCGAACA TGGACCCGAA GCACCGCGAC CGCATCGCCT TCCTGCGCAT CTGCTCGGGC
AGGTACGAGA AGGGCATGAA GATGCGCCAC GTGCGGATCA AGAAGGACCT GAAGATCGCC
GACGCGCTGA CCTTCTTCTC CAGCGAGCGC GAGATGCTGG AAGAGGCCTG GGCCGGCGAC
ATCATCGGCC TGCACAACCA CGGCACCATC CAGATCGGCG ATACCTTCAG CGAGGGCGAG
ATCCTCGGCT TCACCGGCAT CCCGCATTTC GCCCCGGAGC TGTTCCGCCG CGTGCGCCTG
AAGGACCCGC TGAAATCCAA GCAGTTGCGC CAGGGCCTGC AGGAGCTGGC CGAGGAAGGC
GCGACCCAGG TGTTCTTCCC CGAGCGCAGC AACGACATCA TCCTCGGCGC GGTCGGCGTG
CTGCAGTTCG ACGTGGTGGC CAGCCGGCTG AAGGAGGAAT ACAAGGTCGA GTGCGCCTAC
GAGGCGGTCA ACGTCTGGTC GGCACGCTGG ATCGAATGCG ACGACAAGAA GAAGCTCGAG
GACTTCAAGG TCAAGGCCTT CGAGAACATC GCCATCGACG GCGGCGGCCA CCTCACCTAC
CTGGCGCCGA CCCGGGTCAA CCTGAGCCTG ATGGAAGAGC GCTGGCCGGA AGTGAAATTC
CGCGCTACCC GCGAGCATCA CTGA
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| Protein sequence | MTTQAAEVAK RRTFAIISHP DAGKTTITEK LLLMGQAIAV AGTVKSRKSD RHATSDWMEM
EKQRGISITT SVMQFPYREH MINLLDTPGH EDFSEDTYRT LTAVDSALMV LDGGKGVEPR
TIALMDVCRL RDTPIVSFIN KLDRDIRDPI ELLDEIEAVL KIKAAPITWP IGSYKDFKGV
YHLAADRIFV YVPGHGHERI EVPVIQGLDS AEAREHLGDL YDGFVEQLEL VKGACHEFDR
DAFLEGEMTP VFFGTALGNF GVDQVLDCIV DWAPQPLSRA AHERVVEPTE EKFTGFVFKI
QANMDPKHRD RIAFLRICSG RYEKGMKMRH VRIKKDLKIA DALTFFSSER EMLEEAWAGD
IIGLHNHGTI QIGDTFSEGE ILGFTGIPHF APELFRRVRL KDPLKSKQLR QGLQELAEEG
ATQVFFPERS NDIILGAVGV LQFDVVASRL KEEYKVECAY EAVNVWSARW IECDDKKKLE
DFKVKAFENI AIDGGGHLTY LAPTRVNLSL MEERWPEVKF RATREHH
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