Gene Avin_12210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12210 
SymbolfruA 
ID7760164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1176936 
End bp1178675 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content72% 
IMG OID643804124 
ProductFructose phosphotransferase system IIBC component 
Protein accessionYP_002798423 
Protein GI226943350 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component 
TIGRFAM ID[TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.487612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTA GCGTGCTCTG CGCGCGCCTG CTGGAAGCGG CGGCCCTGCG CCTGGGCTGG 
ACCACCCGTG TCGAGGTGCA TGATCCCAGG GCGATCGGCT CGCCGCTCGC CGAGGAAGAC
ATCGCCGCCG CCGATCTGGT GGTGGTGGTC AAGACCGGCG AGCTGGCGCT CGACCGCTTC
GCCGGCAAGC GTCTGCTGCA GTCCACTCCG GCCGATGCGC TGCAGGACCC GCAGCGCTTC
CTCGAAGAGG CCGCCGCGCG TGCCGAGCCG TTCCAGCCGC GGGCGGCCGC GCCGGCTGCC
ACGTCCGGTG CCCAGCCGCG GCTGGTGGCG GTGACCGCCT GTCCGACTGG GGTGGCCCAC
ACCTTCATGG CCGCCGAGGC CCTGCAGCAG GCCGCCAGGC AGCTCGGCTA CGCGCTGCAG
GTGGAGACCC GTGGTTCGGT GGGCGCGCGC AACCTGCTCG ACGAGGCGGC CATCGCCGCC
GCCGACGTGG TGCTGCTGGC CACCGACATC GAGGTGGACA CCAGCCGCTT CGCCGGCAAG
AAAATCTACC GCTGCGGCAC CGGCGTGGCC CTCAAGCAGC CGCAGCAGAC CCTGCGCCGC
GCCCTGGAGG AGGCGCTGCC GCAGGCCGGC GCGAGCCCCG CCGCGGCTGC CTCGCCGGGC
AAGGCGATGA GGAGCGGCCC CTATAAACAT CTCTTGACCG GGGTGTCCTA CATGCTGCCG
ATGGTGGTGG CCGGCGGCCT CCTGATCGCC CTGTCGTTCG TCTTCGGCAT TGAGGCGTTC
AGGGAGGAGG GCAGTCTGGC CGCGGCGCTG ATGCGGATCG GCGGCGACAC CGCGTTCAAG
CTGATGGTGC CGGTGCTGGC CGGCTACATC GCCTATTCCA TCGCCGACCG TCCCGGCCTC
GCGCCGGGGA TGATCGGCGG CCTGCTGGCC GGCGAACTGG GCGCGGGCTT CATCGGCGGC
ATCGCCGCCG GCTTTCTCGC CGGCTATTGC TCCCGCGCCC TCGGCCGCTG GCTGCGCCTG
CCGGCCAGCC TCGAATCGCT CAAGCCGATC CTGCTGATCC CGCTGCTCTC CAGCCTGTTC
ACCGGGCTGG TGATGATCTA CGTGGTCGGT GCGCCGGTGG CCGGCATGCT CGCCGGGCTG
ACCGACTTCC TCAACGGCAT GGGCAGCACC AATGCCGTGC TCCTCGGCCT GCTGCTCGGC
GGCATGATGT GCGTCGACCT GGGCGGGCCG GTCAACAAGG CGGCCTATGC CTTCTCGGTG
GGGCTCCTGG CCTCGCAGAG CTACGCGCCG ATGGCGGCGA CCATGGCGGC CGGCATGGTG
CCGCCGCTCG GCATGGCCAT CGCCAGCCTG CTGGCCCGCT ACAAGTTCGC CCAGGCCGAG
CGGCAGGCCG GCAAGGCCGC CGGCGTGCTG GGACTGTGCT TCATCTCCGA GGGGGCGATA
CCCTTCGCCG CCAGGGACCC GCTGCGGGTG ATCCCGGCGA GCGTCGCCGG CGGCGCCCTG
ACCGGCGCCT TGTCGATGTT CTTCGGCTGC AAGCTGATGG CGCCGCACGG CGGACTGTTC
GTGCTGCTGA TTCCCAACGC GATCAATCAT GCGCTCCTGT ACCTGCTGGC GATCGCCGCC
GGCAGCCTGC TGACCGGGGG GCTGTACGCC GTGCTCAAGC GCGGGGAGGT CGCCGAGATG
GCGGCTGCGA CGGAGCGGCC CGGCCAGCCC GCCGAGCGGC CGTCGGGCCG GCACGCCTGA
 
Protein sequence
MVTSVLCARL LEAAALRLGW TTRVEVHDPR AIGSPLAEED IAAADLVVVV KTGELALDRF 
AGKRLLQSTP ADALQDPQRF LEEAAARAEP FQPRAAAPAA TSGAQPRLVA VTACPTGVAH
TFMAAEALQQ AARQLGYALQ VETRGSVGAR NLLDEAAIAA ADVVLLATDI EVDTSRFAGK
KIYRCGTGVA LKQPQQTLRR ALEEALPQAG ASPAAAASPG KAMRSGPYKH LLTGVSYMLP
MVVAGGLLIA LSFVFGIEAF REEGSLAAAL MRIGGDTAFK LMVPVLAGYI AYSIADRPGL
APGMIGGLLA GELGAGFIGG IAAGFLAGYC SRALGRWLRL PASLESLKPI LLIPLLSSLF
TGLVMIYVVG APVAGMLAGL TDFLNGMGST NAVLLGLLLG GMMCVDLGGP VNKAAYAFSV
GLLASQSYAP MAATMAAGMV PPLGMAIASL LARYKFAQAE RQAGKAAGVL GLCFISEGAI
PFAARDPLRV IPASVAGGAL TGALSMFFGC KLMAPHGGLF VLLIPNAINH ALLYLLAIAA
GSLLTGGLYA VLKRGEVAEM AAATERPGQP AERPSGRHA