Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_11960 |
Symbol | clpB |
ID | 7760138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1147811 |
End bp | 1150375 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643804097 |
Product | ATP-dependent protease |
Protein accession | YP_002798399 |
Protein GI | 226943326 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATCG ACCGATTGAC CAGCAAACTG CAACTTGCCT TGTCCGATGC CCAGTCCGTG GCAGTCGGCC TCGACCACGC CGCCATCGAG CCGCTACACC TGATGCAGGC GCTGCTCGAT CAACAGGGGG GCTCGATCAG GCCGCTCCTG ATGCAGGTCG GCTTCGATAT CAACGGCCTG CGCCAGGCTC TGAGCAAGGA GCTGGATCAA CTGCCCAAGC TGCAGAACCC CACTGGCGAC GTGAATCTGT CCCAGGACCT GGCGCGTCTG CTCAACCAGG CGGACCGCTT GGCCCAGCAG AAGGGGGATC AGTTCATTTC CAGCGAACTG GTGCTGCTCG CCGCGCTGGA CGGCAACACC CGCCTGGGCA AGCTGCTGCT TGGCCAGGGC GTGTCGAAGA AGGCTATCGA GAACGCCATC GGTAACCTGC GTGGCGGCCA GACGGTGAAC GATCCGAATG CCGAGGAGTC CCGCCAGGCC CTGGACAAGT ACTGCGTCGA CATGACCGCC CGGGCCGAGG AGGGCAAGCT CGACCCGGTG ATCGGACGCG ACGACGAGAT CCGCCGCACC ATCCAGGTGC TGCAGCGGCG TACCAAGAAC AACCCGGTGC TGATCGGCGA GCCGGGTGTC GGCAAGACCG CCATCGTCGA AGGCCTCGCC CAGCGCATCG TCAACGGCGA GGTGCCGGAC GGACTCAGGG ACAAGCGCCT GCTGGCGCTG GACATGGGTT CGCTGATCGC CGGCGCCAAG TTCCGCGGCG AGTTCGAGGA GCGCCTGAAG GCCGTGCTCA ACGAGCTGGC CAAGCAGGAG GGGCGCGTCA TCCTGTTCAT CGACGAACTG CACACCATGG TCGGCGCCGG CAAGGCCGAA GGCGCCATGG ATGCCGGCAA CATGCTCAAG CCCGCTCTGG CGCGTGGCGA GCTGCATTGC GTCGGCGCCA CCACCCTCGA CGAGTACCGC CAGTACATCG AGAAAGATGC CGCGCTGGAG CGCCGCTTCC AGAAGGTGCT GGTGGACGAG CCGAGCGAGG AGGACACCAT CGCCATCCTG CGCGGCCTGA AGGAGCGCTA CGAGGTGCAC CATGGAGTGA CCATCACCGA CGGCGCCATC ATCGCTGCGG CCAAGCTGTC GCACCGCTAC ATCACCGACC GCCAACTGCC GGACAAGGCC ATCGACCTGA TCGACGAGGC GGCCAGCCGC ATTCGCATGG AGATCGACTC CAAGCCCGAG GAACTGGATC GCCTGGATCG CCGGCTGATC CAGCTGAAGA TCGAGCGTGA GGCGCTGAAG AAGGAAACCG ACGAGGCGAC CAAAAAGCGC CTGGCCAAGT TGGAAGAGGA CATCGCCAAG CTCGAGCGCG AGTACGCCGA CCTCGAGGAG ATCTGGAAGT CGGAGAAGGC CGAGGTGCAG GGCTCGGCAC AGATCCAGCA GCAATTGGAG CAGGCCAAGC TGGATCTGGA GGCGGCACGC CGCAAGGGTG ATCTGAACCG GATGGCCGAG CTGCAGTACG GTTTGATTCC GGAGCTGGAG CGCAAGCTGG CCTCCGCCGA CGGCGGGCAG CCGCGGGAGA ACCAGTTGTT GCGCAATCGT GTCACCGACG AGGAGATCGC CGAGGTGGTC TCCAAGTGGA CCGGCATCCC GGTGGCCAAG ATGCTCGAGG GCGAGCGCGA GAAGCTGCTG AAGATGGAGG AGTTGCTGCA TCAGCGGGTG ATCGGCCAGA ACGAGGCGGT GACCGCCGTG GCCAATGCGG TGCGGCGTTC CCGCGCCGGG CTCGCCGATC CGAACCGGCC GAGCGGCTCC TTCCTGTTCC TCGGCCCGAC CGGGGTCGGC AAGACCGAGC TGTGCAAGGC GCTGGCCGAG TTCCTCTTCG ATACCGAGGA GGCCCTGGTG CGCATCGACA TGTCCGAGTT CATGGAGAAG CACTCGGTAG CCCGCTTGAT CGGCGCCCCT CCGGGGTATG TCGGCTATGA GGAGGGCGGC TACCTGACCG AGGCGGTGCG CCGCAAGCCT TACTCCGTGG TGCTGATGGA CGAGGTGGAA AAGGCTCACC CCGATGTGTT CAACATCCTT CTGCAGGTGC TGGAGGACGG TCGTCTGACC GATAGCCACG GGCGTACCGT GGACTTCAAG AACACCGTGG TGGTGATGAC TTCCAACCTT GGTTCGGCGC AGATCCAGGA GCTGGCCGGC GATCGCGAGG CGCAGCGGGC GGCGGTGATG GATGCGGTAA GCCACCATTT CCGGCCGGAG TTCATCAACC GCATCGACGA GGTGGTGGTA TTCGACCCGC TGGCCCGCGA GCAGATCGCC GGCATCGCCG AGATTCAGTT GAAGCGCCTG CGCCAGCGTC TGGCCGAGCG CGAGCTGAGC CTCGAACTTT CCGATGAGGC CCTGGACAAG CTGATCGCCG TCGGTTACGA CCCGGTCTAC GGGGCACGGC CCCTGAAGCG GGCGATCCAG CGCTGGATCG AGAACCCGCT GGCGCAGCAG ATTCTCGCCG GGCAGTTCGC GCCTGGCGCG AAGATCTTCG CCAGGGTGGA GGGCGACGAG ATCGTCTTTG GCTGA
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Protein sequence | MRIDRLTSKL QLALSDAQSV AVGLDHAAIE PLHLMQALLD QQGGSIRPLL MQVGFDINGL RQALSKELDQ LPKLQNPTGD VNLSQDLARL LNQADRLAQQ KGDQFISSEL VLLAALDGNT RLGKLLLGQG VSKKAIENAI GNLRGGQTVN DPNAEESRQA LDKYCVDMTA RAEEGKLDPV IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPD GLRDKRLLAL DMGSLIAGAK FRGEFEERLK AVLNELAKQE GRVILFIDEL HTMVGAGKAE GAMDAGNMLK PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSEEDTIAIL RGLKERYEVH HGVTITDGAI IAAAKLSHRY ITDRQLPDKA IDLIDEAASR IRMEIDSKPE ELDRLDRRLI QLKIEREALK KETDEATKKR LAKLEEDIAK LEREYADLEE IWKSEKAEVQ GSAQIQQQLE QAKLDLEAAR RKGDLNRMAE LQYGLIPELE RKLASADGGQ PRENQLLRNR VTDEEIAEVV SKWTGIPVAK MLEGEREKLL KMEELLHQRV IGQNEAVTAV ANAVRRSRAG LADPNRPSGS FLFLGPTGVG KTELCKALAE FLFDTEEALV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG YLTEAVRRKP YSVVLMDEVE KAHPDVFNIL LQVLEDGRLT DSHGRTVDFK NTVVVMTSNL GSAQIQELAG DREAQRAAVM DAVSHHFRPE FINRIDEVVV FDPLAREQIA GIAEIQLKRL RQRLAERELS LELSDEALDK LIAVGYDPVY GARPLKRAIQ RWIENPLAQQ ILAGQFAPGA KIFARVEGDE IVFG
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