Gene Avin_11840 details

Gene Information

• Locus tag: Avin_11840
• Symbol: pilV
• ID: 7760126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1135253
• End bp: 1135786
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643804086
• Product: type IV pilus assembly hypothetical protein, PilV-like protein
• Protein accession: YP_002798388
• Protein GI: 226943315
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4967] Tfp pilus assembly protein PilV
• TIGRFAM ID: [TIGR02523] type IV pilus modification protein PilV; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGCTGA TCGAAGTGCT GGTGACCCTT CTGATCCTGT CCGTGGGGCT GCTTGGCATG 
GCGGCTCTGC AGGTGCGCCT GCAACAGTCG GAGATGGAGG TCTATCAACG CGTCCAGGCG 
CTGCTCCTGC TGAGCGACAT GGCGAACCGG ATCTCGGCCA ACCGCAACGC GGCGGCGGGC 
TATGTGACGG GCGCCGGCAG CCCTGTCGGG GTCGGTTCCG CCTGTGGGAC TTCGACGGCA 
TCGCGCAAGG ACATCGACCT CGGCGAATGG TGTGCCGCCT TGCAGGGCGC GGCGGAAACC 
GGCAGCGATT CGAGCAGGCT GGGAGCCATG CTGGGAGGAC GCGGTTGCAT CGAGTCTCTC 
GGCAGCGACG AGTACCTGAT CACGGTCGCC TGGCAGGGCG GAGGGCCGAT TGCCGCGCCG 
CCGGCCAGTG TCGCCTGCGC AGCGGGGCAA TACGACGGGG ACGGCGGCTC GGCCTGTGCC 
GCTGATCGCT GCCGGCGTGT CGTGACCACC ATCGTGCGGA TCGCCGACCT ATGA 

 

Protein sequence

MTLIEVLVTL LILSVGLLGM AALQVRLQQS EMEVYQRVQA LLLLSDMANR ISANRNAAAG 
YVTGAGSPVG VGSACGTSTA SRKDIDLGEW CAALQGAAET GSDSSRLGAM LGGRGCIESL 
GSDEYLITVA WQGGGPIAAP PASVACAAGQ YDGDGGSACA ADRCRRVVTT IVRIADL