Gene Avin_11830 details

Gene Information

• Locus tag: Avin_11830
• Symbol: pilE
• ID: 7760125
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1134822
• End bp: 1135217
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643804085
• Product: type IV PilE-like pilus assembly protein
• Protein accession: YP_002798387
• Protein GI: 226943314
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCGAA ATGGAAGGCG CGGTTTTACC CTGATCGAAT TGATGATAGT CGTCGCGATA 
ATCGCAATAC TCGCGACGAT CGCCTATCCC GGCTATCGGC AGTACGTTCT GCGCGGCAAT 
CGGGGAGCCG CTCAAGGGGC GATGATGGAA ATCGCCAGCC GCCAGCAGCA GTTTCTGCTG 
GCCAACCGTG CCTATGCCAC CCGGGATGAA CTGGAGAAGA GCGGATATGT ACTGCCGAGC 
GATGTGGCGG CTCACTATGA CTATGCGGTG ACGCCCGGCA GCGGCACGCT TCCTTCCTTT 
CTCATCGCCT TTACCGCCAG GGGCGTGCAG ATGAAGGATG CCGAGAGGCT GACGCTCGAC 
AGCGAAGGGG TGAGAACCCC TGCGGACAAG TGGTGA 

 

Protein sequence

MERNGRRGFT LIELMIVVAI IAILATIAYP GYRQYVLRGN RGAAQGAMME IASRQQQFLL 
ANRAYATRDE LEKSGYVLPS DVAAHYDYAV TPGSGTLPSF LIAFTARGVQ MKDAERLTLD 
SEGVRTPADK W