| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11820 |
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| Symbol | fimT |
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| ID | 7760124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1133994 |
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| End bp | 1134509 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643804084 |
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| Product | type IV pilus biogenesis protein, FimT |
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| Protein accession | YP_002798386 |
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| Protein GI | 226943313 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCGGCT TTTCCCGCGC CTACACGCTG ATCGAACTCA TGACCACCCT CGCCCTGGTC
GGCGTGCTCG CCATGGTCGG CGCCCCCGCG CTCAGCCATA GCGTCGAAGG CCAAAGGGTC
GGCACTACCA GCCGCAACCT CGGCGCCGGC CTCGCCCTGG CCAGGCATGC GGCGATCAGC
CAGAACCATC CGGTACTGGT CGAGAGTCTC GAAGGCGATT GGGAGGCAGG CTGGAGGGTG
TATGTCGATG CCAATTCGAA TGGCGCTTTC GATCCCGGCG AGCGGGAGCT GTCGAGACAG
GGCAAAGCCC CCAGCGGCGT GCGAATCGCG CCGAACAGTC CTGTCCGGGG CTATGTGCGC
TATATCGCGA CGGGGCAGGC GCAACTGGCG AGTGGAGCCT TCCAGGCCGG AACCTTCACT
ATCTGCCACC AGAACGGCCG GCATGCCGTG AGAAGCCTGA TCCTGAACGC CAGCGGCCGG
GTCCGCTCGA CCCGGAACGC TCCCGGTACC TGCTGA
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| Protein sequence | MPGFSRAYTL IELMTTLALV GVLAMVGAPA LSHSVEGQRV GTTSRNLGAG LALARHAAIS
QNHPVLVESL EGDWEAGWRV YVDANSNGAF DPGERELSRQ GKAPSGVRIA PNSPVRGYVR
YIATGQAQLA SGAFQAGTFT ICHQNGRHAV RSLILNASGR VRSTRNAPGT C
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