| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11620 |
|---|
| Symbol | valS |
|---|
| ID | 7760104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1115343 |
|---|
| End bp | 1118177 |
|---|
| Gene Length | 2835 bp |
|---|
| Protein Length | 944 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643804064 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_002798366 |
|---|
| Protein GI | 226943293 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA CCTACCAGCC GCACGCAATC GAATCCCGTT GGTACGCCGA GTGGGAGTCG
AAGAACTACT TCGCCCCGCA GGGCAGCGGC GAACCCTACA CCATCATGAT TCCGCCGCCG
AACGTCACCG GCAGCCTGCA CATGGGCCAC GGCTTCAACA ACGCGATCAT GGACGCGCTG
ATCCGCTTCC GCCGCATGCA GGGGCGCAAT ACCCTGTGGC AGCCGGGCAC CGACCACGCC
GGCATCGCCA CCCAGATGGT AGTGGAGCGC CAACTGGCGG CCCTGGGCCT CGACCGCCAC
GCGCTCGGTC GCGAGAAGTT TCTCGACAAG GTCTGGGAAT GGAAGGAGCA GTCCGGCGGC
ACCATCACCC GGCAGATTCG CCGCCTCGGC AGCTCGGTGG ACTGGTCGCG GGAACGCTTC
ACCATGGACG AGGGCCTTTC CGAAGCGGTC AAGGAAGCCT TCGTCCGCCT CCACGAGGAC
GGCCTGATCT ACCGCGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACCGCGATC
TCCGACCTGG AAGTGGAGAA CCACGACGAA AAGGGCCACC TCTGGCACCT GCGCTACCCG
CTGGCCGACG ACGCCTGCAC CGCCGAAGGC AAGGACTACC TGGTGGTCGC AACCACCCGC
CCGGAAACCA TGCTGGGCGA CGCCGCCGTC GCCGTACACC CGGAGGACGA GCGCTACCGG
GACCTGATCG GCCGCCACGT GCTGCTGCCG CTGGTCAACC GCCTGATCCC GATCGTCGCC
GACGAGTACG TCGACCGCGA ATTCGGCACC GGCTGCGTGA AGATCACCCC GGCCCACGAC
TTCAACGACT ACGAGGTCGG CAAGCGCCAC CACCTGCCGC TGATCAACAT CTTCGACAAG
AACGCCGGCA TCCTGGCCCA GGCCCAGGTG TTCGACATCG ACGGCACGCC GAACACCCGC
GTCGCCCCCA GCCTGCCGGA CGGCTACGCC GGCATGGACC GCTTCGACGC GCGCAAGGCC
ATCGTCGCCG ACTTCGAGGG CATGGGCCTT CTCGAGAAGA TCGACGACCA TGCCCTGAAG
GTGCCGCGCG GCGACCGTTC CGGCACCATC ATCGAACCCT GGCTGACCGA CCAGTGGTAC
GTCTCCACCA AACCGCTGGC CGAGAAGGCC ATCGCCGCCG TCGAGGACGG TTCCATCCAG
TTCGTGCCCA GGCAGTACGA GAACATGTAT TTCTCCTGGA TGCGCGACAT CCAGGACTGG
TGCATCAGCC GCCAGCTCTG GTGGGGCCAC CGCATCCCGG CCTGGTACGA CGAGGCCGGC
AACGCCTACG TCGGCCGCGA CGAGGCGGAA GTGCGCAGCA AGTACGCGAT CCGCAACGAC
GAGCCGCTGC GCCAGGACGA AGACGTGCTG GACACCTGGT TCAGCTCCGG CCTGTGGACC
TTCTCCACCC TCGGCTGGCC GCAGCAGACC GAGTTCCTCA AGACCTTCCA CCCCACCGAT
GTGCTGGTCA CCGGCTTCGA CATCATCTTC TTCTGGGTCG CCCGGATGAT CATGCTGTCC
CTGCACCTGA CCGGGCAGAT CCCCTTCAGG ACCGTCTACG TCCATGGCCT GGTACGCGAC
AGCCAAGGCC ACAAGATGTC CAAGTCCAAG GGTAACGTGC TCGACCCGCT GGACATCGTC
GACGGCATCG ACCTGGAAAG CCTGGTGACC AAGCGCACCA GCGGCATGAT GCAGCCCAAG
CTCGCCGAGA AGATCGCCAA GCAGACCCGC GCCGAATTCC CCGAGGGCAT CGCCAGCTAC
GGCACCGACG CGCTGCGTTT CACCTTCTGC TCGCTGGCCT CCACCGGCCG CGACATCAAG
TTCGACATGG GCCGGGTCGA GGGCTACCGC AACTTCTGCA ACAAGCTGTG GAACGCCGCC
AACTTCGTCT TCGAGAACAC CGAGGGCAAG GATTGCGGCG CCGCCGACGA ACCCGTCGAG
CTGTCCCCGG TGGACCGCTG GATCGTCTCG GCGCTGCAGC GCACCGAGCA GGAGGTGACC
CGCCAGCTCG ACGCCTTCCG CTTCGACCTC GCTGCCCAGG CGCTCTACGA GTTCATCTGG
GACCAGTACT GCGCCTGGTA CCTGGAGCTG GTCAAGCCGG TGCTCTGGGA CGAGACTGCT
AGCGTCGAGC GCCAGCGCGG CACTCGGCGC ACCCTGGTGC GGGTGCTGGA AACCGCCCTG
CGCCTGGCGC ACCCCTTCAT GCCTTTCATC AGCGAGGAAA TCTGGCAGCG CCTCGCGCCG
CTGGCCGGCA AGTCCGGCCC GACCCTGATG CTGCAACCCT GGCCGCTGGC CGACGAGGCG
CGCATCGACG CGGCCGCCGA GGAGGACATC GAGTGGGTCA AGGCGCTGAT GCTCGGCATA
CGGCAGATCC GCGGCGAAAT GAACATCTCC ATGGCCAAGC GCATTGACGT GGCGCTGAAC
AACGCCTCGG ACAGCGACCG GCGGCGCCTC GAAGAAAACC GGCCGTTGCT GACGAAACTG
GCCAAGCTGG AATCCATCCG CGTGCTGGAA GCCGGCGAGG AAGCACCGCT GGCCGCCACC
GCGCTGGTCG GCGAGATGCA GGTGCTGGTG CCGATGGCCG GGCTGATCGA CAAGGACGCC
GAACTGGCCC GTCTGGACAA GGAGATCCAG CGCCTGGAAG GCGAGGTCAA GCGCGTCGGC
GGCAAGCTGG GCAACGCCAG TTTCGTCGAC AAGGCCCCGG CCGAGGTGAT CGCCAAGGAG
CGCGCCAGAC TGAACGAGGC CGAACAGGCC TTGGGCAAGC TGGGCGAACA GCGCGCGCGC
ATCGCCAGCC TCTGA
|
|---|
| Protein sequence | MDKTYQPHAI ESRWYAEWES KNYFAPQGSG EPYTIMIPPP NVTGSLHMGH GFNNAIMDAL
IRFRRMQGRN TLWQPGTDHA GIATQMVVER QLAALGLDRH ALGREKFLDK VWEWKEQSGG
TITRQIRRLG SSVDWSRERF TMDEGLSEAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI
SDLEVENHDE KGHLWHLRYP LADDACTAEG KDYLVVATTR PETMLGDAAV AVHPEDERYR
DLIGRHVLLP LVNRLIPIVA DEYVDREFGT GCVKITPAHD FNDYEVGKRH HLPLINIFDK
NAGILAQAQV FDIDGTPNTR VAPSLPDGYA GMDRFDARKA IVADFEGMGL LEKIDDHALK
VPRGDRSGTI IEPWLTDQWY VSTKPLAEKA IAAVEDGSIQ FVPRQYENMY FSWMRDIQDW
CISRQLWWGH RIPAWYDEAG NAYVGRDEAE VRSKYAIRND EPLRQDEDVL DTWFSSGLWT
FSTLGWPQQT EFLKTFHPTD VLVTGFDIIF FWVARMIMLS LHLTGQIPFR TVYVHGLVRD
SQGHKMSKSK GNVLDPLDIV DGIDLESLVT KRTSGMMQPK LAEKIAKQTR AEFPEGIASY
GTDALRFTFC SLASTGRDIK FDMGRVEGYR NFCNKLWNAA NFVFENTEGK DCGAADEPVE
LSPVDRWIVS ALQRTEQEVT RQLDAFRFDL AAQALYEFIW DQYCAWYLEL VKPVLWDETA
SVERQRGTRR TLVRVLETAL RLAHPFMPFI SEEIWQRLAP LAGKSGPTLM LQPWPLADEA
RIDAAAEEDI EWVKALMLGI RQIRGEMNIS MAKRIDVALN NASDSDRRRL EENRPLLTKL
AKLESIRVLE AGEEAPLAAT ALVGEMQVLV PMAGLIDKDA ELARLDKEIQ RLEGEVKRVG
GKLGNASFVD KAPAEVIAKE RARLNEAEQA LGKLGEQRAR IASL
|
|---|
| |