| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11550 |
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| Symbol | |
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| ID | 7760097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1105374 |
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| End bp | 1108787 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643804057 |
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| Product | ATP-dependent dsDNA exonuclease SbcC |
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| Protein accession | YP_002798359 |
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| Protein GI | 226943286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.055976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATCC TCAGCCTGCG CCTGAAGAAC CTCAACTCGC TGAAGGGCGA GTGGAAGATC
GATTTTCGCG AAGCGCCGTT CAGGGACAAC GGCCTGTTCG CCATCACCGG GCCGACCGGC
GCCGGCAAGA CCACCCTGCT CGACGCCATC TGCCTGGCTC TCTATCACCG CACGCCGCGC
ATGGACCGTT TATCCAAGGA GTCCAACGAG CTGATGACCC GGCACACCGC CGAGTGCCTG
GCCGAGGTGG AATTCGAGGT GAAGGGCCGG GGCTACCGCG CCTTCTGGAG CCAGCGCCGC
GCCCGTGACC GGGCCGACGG CGCGCTGCAG ATGCCCAGGG TCGAGCTGGC CGCGGCGGAC
GGCAGCATCC TCGCCGACAA GGTCGGCGAC AAGCTGGCGC GGATCGAGGC GCTCACCGGC
CTCGACTTCG CGCGTTTCAC CCGCTCCATG CTGCTCGCCC AGGGCGGTTT CGCCGCCTTT
CTCGAGGCCG ATGCGAAGAG CCGCGCCGAA CTTCTGGAGC AGCTCACCGG CACCGACATC
TACGGGCGGA TCTCCCAGCG GGTGTTCGAA CATGCCCGCG AGGCGAAGGT GGCCCTCGAA
CGGCTGCAGG AGCGGGCCGC CGGAGTCGAG CTGCTGGATG ACGGGGAGCG CCGAGCCCTG
GAAGAGCGGG CCGCCGTGCT GGCCGCCGAG GAGGCGCCGT TGCTGGCGCG CCAGGGCGAG
CTGCAGGCCC GGCGCCAGTG GCGCGCGGAG CTGGAGCAGG CGGAGCTGCG CTGCCGGGAG
GCGGGGGAGG CGAGTCGACG AGCCGGCTTG GCGCTGGCCG AAGCCGCGCC GCAACTGGCC
CGGCTGGCGG CCGGCGAGCC GGCCGCCGCG TTGCTGCCTG CGCATCGGGA CTGGCAGCAG
GCGTGCCAGC AACTGGAGCA GGGCGAGCGC AATCTGACGC AGATCCGTGC CGAGCGGCGC
CAGGCCGGCG AGGCGGTCGG CCTGCATCTG TGGCAGGCCG GCCAATTCGC CCGGCGGATC
GCCGTGGCGG CGCAGGAGCA GGCCCGGCGG TTGCACTCGC AGCACCGGCA ACTGGCCGAG
CAATTGGCCG AACAGCCACG GTATGCCGAG CTGGGCGAGC GCCTCGGTGC CTGGCGCGAA
CGATTCGAAT GCCACCGCCA GTGGCAGGAA GAGATCGCCG CGCTCCAGGA CCGGCAGCGA
AACGAACAGG CCGCGCTCGC CGAGCTGGGC GAAAGGCAGC GGCAGGCGCA GGAGCATCTG
CGGCGCCGGC AGGCCGAGCT GGACAGCGCC TGCGCGGCCG AACGCCAGGC CCGCGAGAGT
CTGGACACGC TGCTGCAGGG CGAGCCCGAA AGCGCGCTGC GCGAACACTG GCGGCAGGCG
CAGTCCCGCC GCAACCTGCT GCAGCAACTG GAGCAGAATG CCCGCCAGCG CGGCAGCGGC
GAAGCGCGTC TGGCCGCCAT CGACGCCGAA CTGGCCGACG GTCGGCGGCG GCATGGCGAG
CAGCAGGCGC GTCTCGAATT GCTGCGCCAG CGTTACAGGG ATTCGCAGGC GCTGGTCGCG
GCGAGGAAAA AACTGCTGGA GCAGGAGCGG CGCATTCTCG ATCTGGAAGC CCAGCGGAGC
CAGTTGCAGC CGGGCGAGCC CTGCCCGCTG TGCGGCTCCC GCGAGCATCC GGCCGTCGAC
ACCTACCGGG CGCTGGACCT TTCCGCCGGC GAACGGGACT TGCAGGCCGC CGAGGCGGAG
CTGGAGGCGC TACTCCGCGA AGGCGAGGCG GCACGGGACG CGCTGGCCGT GCTCGACGCC
GAACTCGGGG CGCTGCGCCG GCGCCGCGAA CAGGACGGGG ACGAGTTGCG CCGGCAGCGT
GAACAGTGGC GGCAACTGTG TGCGGAGCTG GGCACGGAGC CAATCGATCT GGCGGCCATC
CGGGATGCGC TGGACGAACG GCTGGCGGCA TTCGAAGGGC GTCTGCAACA GCTCGAACTC
GGCCGGCAGG CCGTGGCGCA ATCCGCCGAG GCGCGCCAGC GGATGGAGCG CGCTTGCGAG
CAGGATGGTC AGCAGGTGCG GTTGCTCGAA GAACGCCTGC TCGCCAGTCG CGGTCGCGCG
CAGGAGCTGG ACGAACGCTT GCGCCAGTGC AGGGAGCTGT TGAGTCGCGG CGAGCAGGCC
CTGGCCGAGG AACTGGCCGC CTTCGGCCAT CCGCTGCCGG ACGACGGCGC GGCCTGGCTC
GCGCGGCGGC AGGGCGAGTG GCAGGACTGG CAGCGGCGGC AGAACCGTCT GCAGCAACTG
GAGCGCGAGC GGCTGGAGCA GAGCGCCCTG GTCGAGGCCG CCGAGAAGCA GGCGGCGCTC
TGGCAAGGAC GCTGGAGCGA ACTGGGCGAA GCCGGGCGGA CCGCCCCGGC CGAATGCGTC
GATGCCCAGG ACGCCCTCGC CGGGGCGGAA GCCGGACTGG ACGCTGCCCG GCGCCGGGCC
AACGAACTGG ACGGGCGCCT GCTGTCGCTG GAAGAACAGG TACGGCAGCA GCGCCGCCAT
CTGGAGGCCT GCGGCGCGCA CTGGCGGGCG CAATTGGCGC GGAGTCCGTT CGCCGACGAG
GCGGCATTCC GCGCGGCGCT GCTCGACGAT GCCCAGCGTG CCGCCCTGCA GGACCTCAAG
GCGCGTCTGG AACGGGCGCG GACCGAGGCA CTGGCCCTGC TCGCCGCCGC CGAGGGGCGG
TTGGCCGGCC TGCTGGCCGA ACCCCGGACC ACGGCCAGCG GCGAGGAACT GGAGCGACAG
GCGCAGGAAC TGGCCGGGCG GCTGCGGAGC CTGGCCGAGG AGCAGGGGGC GATCCGCGCC
ACGCTGTCCG CCGACGACGA GCGCCGGCAA GGCCGGCAGG CGCTGTTCGC GGAGATCGAG
CGCTGCCGGG CCGAGTACGA TCTCTGGCAG CACCTCAACG GGCTGATCGG CTCGGCCGAC
GGCGCCAAGT ACCGCAAGTT CGCCCAGGGC CTGACCCTCG ACCATCTGGT CTGGCTGGCC
AACCGCCAAC TGGCGCGTCT GCACGGCCGT TACCAACTGG CACGACGTTC CGACGGCGAA
CTGGAGCTGG AGGTCGTCGA CACCTGGCAG GGCGACGCGA CCCGCGACAC CCGCACCCTG
TCCGGCGGCG AGAGCTTCCT GGTCAGCCTG GCCCTGGCCC TGGCGCTGTC CGACCTGGTC
AGTCACAAGA CCAGCATCGA CTCGCTGTTT CTCGACGAGG GCTTCGGCAC CCTCGACGGC
GAGACCCTGG AGGTGGCCCT GGACGCCCTG GACAGCCTCA ACGCCAGCGG CAAGACCATC
GGCGTGATCA GCCACGTCGA AGCGCTCAAG GAGCGCATCC CGGTGCAGCT CAGGGTGAGC
AAGGGCGTGG GGATGGGCTA CAGCGCCCTG GAAAGGCGCT TCGCCCTGTC CTGA
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| Protein sequence | MKILSLRLKN LNSLKGEWKI DFREAPFRDN GLFAITGPTG AGKTTLLDAI CLALYHRTPR
MDRLSKESNE LMTRHTAECL AEVEFEVKGR GYRAFWSQRR ARDRADGALQ MPRVELAAAD
GSILADKVGD KLARIEALTG LDFARFTRSM LLAQGGFAAF LEADAKSRAE LLEQLTGTDI
YGRISQRVFE HAREAKVALE RLQERAAGVE LLDDGERRAL EERAAVLAAE EAPLLARQGE
LQARRQWRAE LEQAELRCRE AGEASRRAGL ALAEAAPQLA RLAAGEPAAA LLPAHRDWQQ
ACQQLEQGER NLTQIRAERR QAGEAVGLHL WQAGQFARRI AVAAQEQARR LHSQHRQLAE
QLAEQPRYAE LGERLGAWRE RFECHRQWQE EIAALQDRQR NEQAALAELG ERQRQAQEHL
RRRQAELDSA CAAERQARES LDTLLQGEPE SALREHWRQA QSRRNLLQQL EQNARQRGSG
EARLAAIDAE LADGRRRHGE QQARLELLRQ RYRDSQALVA ARKKLLEQER RILDLEAQRS
QLQPGEPCPL CGSREHPAVD TYRALDLSAG ERDLQAAEAE LEALLREGEA ARDALAVLDA
ELGALRRRRE QDGDELRRQR EQWRQLCAEL GTEPIDLAAI RDALDERLAA FEGRLQQLEL
GRQAVAQSAE ARQRMERACE QDGQQVRLLE ERLLASRGRA QELDERLRQC RELLSRGEQA
LAEELAAFGH PLPDDGAAWL ARRQGEWQDW QRRQNRLQQL ERERLEQSAL VEAAEKQAAL
WQGRWSELGE AGRTAPAECV DAQDALAGAE AGLDAARRRA NELDGRLLSL EEQVRQQRRH
LEACGAHWRA QLARSPFADE AAFRAALLDD AQRAALQDLK ARLERARTEA LALLAAAEGR
LAGLLAEPRT TASGEELERQ AQELAGRLRS LAEEQGAIRA TLSADDERRQ GRQALFAEIE
RCRAEYDLWQ HLNGLIGSAD GAKYRKFAQG LTLDHLVWLA NRQLARLHGR YQLARRSDGE
LELEVVDTWQ GDATRDTRTL SGGESFLVSL ALALALSDLV SHKTSIDSLF LDEGFGTLDG
ETLEVALDAL DSLNASGKTI GVISHVEALK ERIPVQLRVS KGVGMGYSAL ERRFALS
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