| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11420 |
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| Symbol | |
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| ID | 7760084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1092056 |
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| End bp | 1094050 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643804044 |
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| Product | sigma54-dependent activator protein |
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| Protein accession | YP_002798346 |
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| Protein GI | 226943273 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCCCG TGCCGGAAAA CGACGACCGC ATCAAGGTTT TGTGGGAGAG GTTCCTCAAT
GGCGGCGAGC CCGGATCGGA TGCGCTGCGC CGCCTGATCG ACGACTCCTG GCGGCGCTGC
CTCGGCGCCA GCGTCGACCC GGACCGCTTC CAGGCGCCGC CGCCGCTCAG CGAGCATTCC
CTGCATTCCC TGCGCGACGA ATCCGCCGAC CTGCTGAGCG CCAGCGCGCC CATCATGGCG
GCGGCGCGGG ACTTCCTCGC CGAAACCGGA ACGGTGATGG TGCTCGCCAA CCCGAGCGGC
ACCATCCTCA ATCTCGAAGG GGACGTGTCC ACCCGCGGCC TGGCGGAAAA CATCTATCTG
CTGTCGGGGG CGAACTGGAG CGAACTGGCC TGCGGCACCA ACGCGATCGG CACCGCGCTG
GAGGTCGGCC AGCCGGTGCA GATCCATTCG GCGGAACACT ATTGCGCCGG CATCAAGCGC
TGGTCCTGTT CGGCGACGGT GATCCGCGAC CCCTGCGACG GCAGCATCCT CGGCGTGGTC
GACGTGTCGG GGCTCAGCGC CTCCTACAGC CGCCACAGCC TCGCCCTGGT CGTGGCGACG
GCCGGGCGTA TCGAGAGCCG TCTGGCGAAA ATGGAAATGG ATGTCCGTTA CCGACTGCTG
GAAACCTGCA TCGGTCGCCT GTCGCCGAGC GCGACCGACG GCATCGTCGT GTTCGACCGG
CGCGGCCGCG CCATCCAGGC GAATGCGCGC GCCTCGGCGA TGGTGGCCGA CCTGGCCAGC
CGCGAGCCGC TCGGCTCGAC CGGCGAGCTC GGCGCCTTGT CGCTGAAATG GGAGAAAAAC
GGCGGGCTCG CCGAGCACCT GCCCGAATGG ATGGACCCGG ACTGGCTGCA GCCGGTGATC
GTCGGCAACC AGCATCTCGG CACGCTGCTG ACGCTGCCGA ACCGGCGCGC GCCCGGCGCC
GGCGCGGCCA GCCCGGCCGT CCTCGACGAG AGGTTCGACG AGAGCGGCTT CGACAAGGTG
GTCGGCGAAT CGACGGCGCT GCTGCAGGCG GTCGGCCGTG CCCGGCAGCT CGCGAAATCC
CGCGTCCCGG TCCTGCTGCT GGGCGAGACC GGCGTGGGCA AGGACGTGTT CGCGCGCGGC
ATACACGAAT CCGGCGCGAC CCGCGACGGC CCCTTCGTCG CCCTGAATTG CGGCGGCTTC
TCGCGCGAGC TGTTGACCAG CGAGCTGTTC GGCTACGTCG AAGGCTCGTT CACCGGCGCA
CGGCGCGGCG GCATGATGGG CAAGATCGAG GCGGCCGACG GCGGCACCCT GTTCCTCGAC
GAGATCGGCG AGATGCCCAT CGACCTCCAG CCCCATTTCC TCCGGGTGCT GGAGGAAGGC
GAGGTCTATC GCATCGGCGA GACCAAGCCG CGCAAGGTCA ATTTCCGCCT CGTCGCCGCG
ACCAACCGCG ACCTGCACAA GGAAATCCAG GCCGGCACCT TCCGCATGGA CCTCTTCTAC
CGGGTCGCGG TGACCAGCAT CCACATCCCG TCCCTGCGCG AGCGACTCGG GGACATTCCC
CTGCTCGGCG AACACTACCT CGACATCCTG ACCCGCCAGC ACGGGCTCGC ACCGCGGACG
CTGTCGGCCG GCGCGGTGAC CCTGCTGCAG CGCTACGCCT GGCCGGGCAA CATCCGCGAG
TTCCGCAACG TCATCGAAAG CATGCTGCTC ACCTCGCCGG CGAGCGTGCT CGGCGAAGCC
GACGTGCCGC TCGACGGGCG CTGCGTGGCC CACGCGACAC GCCAGCCGGA ACCCGACGCG
CAGGACGAGG CGCGCGATCT GAACGGCCTG GAAAGCGCCG AGCGCGAGGT CATTCGGCGA
ACCGTCAAGG GCTGTCGCGG CAACATGACC GCGGTGGCGC GGGAACTGGG CATAGCCAAG
AGCACCGTCT ACGCGAAGCT CAAGCGCTTC GGCCTGGAAA CCTACGTGGA AGATCTGCGC
AACTACCGCG CCTGA
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| Protein sequence | MFPVPENDDR IKVLWERFLN GGEPGSDALR RLIDDSWRRC LGASVDPDRF QAPPPLSEHS
LHSLRDESAD LLSASAPIMA AARDFLAETG TVMVLANPSG TILNLEGDVS TRGLAENIYL
LSGANWSELA CGTNAIGTAL EVGQPVQIHS AEHYCAGIKR WSCSATVIRD PCDGSILGVV
DVSGLSASYS RHSLALVVAT AGRIESRLAK MEMDVRYRLL ETCIGRLSPS ATDGIVVFDR
RGRAIQANAR ASAMVADLAS REPLGSTGEL GALSLKWEKN GGLAEHLPEW MDPDWLQPVI
VGNQHLGTLL TLPNRRAPGA GAASPAVLDE RFDESGFDKV VGESTALLQA VGRARQLAKS
RVPVLLLGET GVGKDVFARG IHESGATRDG PFVALNCGGF SRELLTSELF GYVEGSFTGA
RRGGMMGKIE AADGGTLFLD EIGEMPIDLQ PHFLRVLEEG EVYRIGETKP RKVNFRLVAA
TNRDLHKEIQ AGTFRMDLFY RVAVTSIHIP SLRERLGDIP LLGEHYLDIL TRQHGLAPRT
LSAGAVTLLQ RYAWPGNIRE FRNVIESMLL TSPASVLGEA DVPLDGRCVA HATRQPEPDA
QDEARDLNGL ESAEREVIRR TVKGCRGNMT AVARELGIAK STVYAKLKRF GLETYVEDLR
NYRA
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