Gene Avin_10900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10900 
SymbolalgL 
ID7760034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1039431 
End bp1040555 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID643803994 
Productpoly(beta-D-mannuronate) lyase 
Protein accessionYP_002798296 
Protein GI226943223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGA CCAGACTCGC CCTCTCCTGC CTGCTCGGCA GCCTGCTGTT GAGCGGCGCC 
GTCCACGCCG CCGAAGCCCT GGTTCCGCCC AAGGGCTACT ACGCGCCGGT GGATATCCGC
AAAGGCGAGG CGCCGGCCTG TCCGGTGGTG CCCGAACCCT TCACCGGGGA ACTGGTCTTT
CGCAGCAAGT ACGAAGGCTC GGACGCGGCC CGGTCGACCC TCAACGAGGA AGCGGAAAAG
GCCTTCCGCA CCAAGACCGC GCCGATCACC CAGATCGAGC GCGGCGTCAG CCGGATGGTC
ATGCGCTACA TGGAGAAAGG CCGCGCCGGC GACCTGGAAT GCACCCTGGC CTGGCTGGAC
GCCTGGGCCG AAGACGGCGC CCTGCTCACC ACCGAGTACA ACCACACCGG CAAATCCATG
CGCAAGTGGG CCCTCGGCAG CCTGGCCGGC GCCTACCTGC GCCTGAAATT CTCCAGTTCG
CAGCCGCTGG CGGCCTATCC CGAACAGGCA CGGCGCATCG AGAGCTGGTT CGCCAAGGTG
GGCGACCAGG TGATCAAGGA CTGGAGCGAC CTGCCGCTCA AGCGGATCAA CAACCACTCC
TACTGGGCGG CCTGGGCGGT CATGGCCGCC GGCGTGGCGA CCAACCGCCG GCCGCTGTTC
GACTGGGCGG TCGAGCAGTT CCACATCGCC GCCGGGCAGG TCGACTCGAA TGGCTTCCTG
CCCAACGAAC TCAAGCGCCG CCAACGTGCG CTGGCCTACC ACAACTACAG CTTGCCGCCC
CTGATGATGG TCGCCGCCTT CGCCCTGGCC AACGGTGTCG ACCTGCGCGG CGACAACGAT
GGCGCCCTGG GCCGCCTGGC CGGCAACGTG CTGGCCGGCG TCGAGAAGCC CGAACCGTTC
GCCGAACGGG CCGGCGACGA GGATCAGGAC ATGGAGGATC TGGAGACCGA CGCCAAGTTC
TCCTGGCTGG AACCCTACTG CGCGCTCTAC TCCTGCTCCC CCGCCCTGCG GGAAAGGAAG
GCCGAGATGG GCCCGTTCAA GAATTTCCGC CTGGGTGGCG ACGTGACCCG GATCTTCGAT
CCGGCCGAGA AGTCGCCCAG ATCGACCGTC GGCAAGCGCG ACTAG
 
Protein sequence
MHKTRLALSC LLGSLLLSGA VHAAEALVPP KGYYAPVDIR KGEAPACPVV PEPFTGELVF 
RSKYEGSDAA RSTLNEEAEK AFRTKTAPIT QIERGVSRMV MRYMEKGRAG DLECTLAWLD
AWAEDGALLT TEYNHTGKSM RKWALGSLAG AYLRLKFSSS QPLAAYPEQA RRIESWFAKV
GDQVIKDWSD LPLKRINNHS YWAAWAVMAA GVATNRRPLF DWAVEQFHIA AGQVDSNGFL
PNELKRRQRA LAYHNYSLPP LMMVAAFALA NGVDLRGDND GALGRLAGNV LAGVEKPEPF
AERAGDEDQD MEDLETDAKF SWLEPYCALY SCSPALRERK AEMGPFKNFR LGGDVTRIFD
PAEKSPRSTV GKRD