Gene Avin_10880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10880 
SymbolalgV 
ID7760032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1036560 
End bp1037726 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID643803992 
ProductAlginate biosynthesis protein AlgV 
Protein accessionYP_002798294 
Protein GI226943221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA CAACCAACCT GGTCTACGCC GGTACCTTCG CCGGCACCCT GCTGGCGCTC 
AGCCTGTGGT CGCTGAAAGG CGCCGCCGGC TTCTCCACCG CCGATAACAC CCCGGTGCTC
AACGGCAAGC TGGCCCTGGC CTTCGAGAAA CACTACGACG AGGAATTCCC GATCAAGAAG
CTCGGCACCA ACCTCTGGGC GGCGCTGGAC TACACGCTGT TCGGCGAAGG CCGTCCCGGC
GTGGTGATCG GAGCCAACCA GTGGCTGTTC AGCGACGAGG AGTTCAAGCC CACCGCCGCC
GCCTCGCAGA ACATCACGGA CAACCAGGCG CTGATCCAGG GCGTGCGTGA AACCCTGGCA
CGGAACAACG TGCAACTGGT GATGGCGATC CTGCCGGCCA AGGCACGCCT GTACCCGGAG
AACTTCGGCG AGCAGCAGCC CGCGTCCCTG CACGAGCAGC TCTACCAGAA CTTCCGCCGG
ATCGTGGCCG ATGCCGGCAT CCAGGCACCC GACCTGCTCG GCCCGCTGCA GCAGGCCAAG
GCCGGGGGCC AGGTGTTCCT GCGCACCGAC ACCCACTGGA CGCCCTACGG CGCCCAGGTG
GTCGCCGGCC AGTTGGCCAC GACGATCAAG CCGATCGGCG TGCTCCCGGA AAGCGGCAAC
GTCTACGTCA CCGAAACCCT GCCGGGCGGG CCGCACAAGG GCGACCTGAC CAACTTCCTG
CCGCTCGACC CGCTGTTCGA GGAACTGCTG CCGCCGCCGG ATCAACTGGC CAAGCACAAC
ACCCGCCAGC AGGAGGAAAG CGCCCCCGCC GGGGACGACC TGTTCGCCGA AACCCAGGTG
CCGGTGGCCC TGGTCGGCAC CAGCTACAGC GCCGACGAAC GCTGGAACTT CGCCGGCGCG
CTGCGCCAGG CGCTCGGCAG CGACCTCGTG AACTTCGCCG AGGACGGCCG CGGGCCACTC
CTGCCGATGC TCAAGTTCCT GCAGAGCGAG GACTTCAAGA AATCCCCGCC GCGCCTGGTG
ATCTGGGAAT TCCCCGAGCG TTACCTGCCG ATGGCCTATG ACCTGAGCGA GTTCGACGCC
GACTGGATCG CCCAGCTCAA GGCCGCCGGC CGCCAGGACA AGCAGTTGGC CGACAACACC
GCTACCAACC AGGGCGCACG CCACTGA
 
Protein sequence
MNRTTNLVYA GTFAGTLLAL SLWSLKGAAG FSTADNTPVL NGKLALAFEK HYDEEFPIKK 
LGTNLWAALD YTLFGEGRPG VVIGANQWLF SDEEFKPTAA ASQNITDNQA LIQGVRETLA
RNNVQLVMAI LPAKARLYPE NFGEQQPASL HEQLYQNFRR IVADAGIQAP DLLGPLQQAK
AGGQVFLRTD THWTPYGAQV VAGQLATTIK PIGVLPESGN VYVTETLPGG PHKGDLTNFL
PLDPLFEELL PPPDQLAKHN TRQQEESAPA GDDLFAETQV PVALVGTSYS ADERWNFAGA
LRQALGSDLV NFAEDGRGPL LPMLKFLQSE DFKKSPPRLV IWEFPERYLP MAYDLSEFDA
DWIAQLKAAG RQDKQLADNT ATNQGARH