Gene Avin_10700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10700 
Symbol 
ID7760014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1016350 
End bp1017243 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID643803974 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_002798276 
Protein GI226943203 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.694075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCG GCTTTATCGG CCTGGGCAAC ATGGGTGCGC CCATGGCCCG CAACCTGCTC 
GCGGCCGGCC ACCGCCTGAG CGTCCACGAC CTCTCCGCGC CGGCCGTGGC CGGCCTGGCG
CAGGCTGGCG CCACGGTGGC GGACTCCCCG GCGGCCCTGG CCCGGGAGGT CGAACTGATC
ATCACCATGC TGCCCGCATC CGCCCACGTG AAAGGCGTCT ATCTCGGCGA GGACGGCCTG
CTCGCCCAGG TCCGCCCCGG CGTGATGCTG ATCGACAGCT CCACCATCGA TCCGCTGAGC
GCCCGGGAAG TGGCCGCCGC CGCCCGCGAG CACGGCAACC CGATGCTCGA CGCGCCGGTG
TCCGGCGGTA CCGCCGGCGC CGCCGCCGGC ACCCTGACCT TCATGGTCGG CGGCGAAACG
GCCGACTTCG AACGCGCCCG CCCGGTGCTC GCCGCCATGG GCAAGAACAT CGTCCACTGC
GGCCCCGCCG GCAACGGCCA GGTCGCCAAG GTGGCCAACA ACATGCTGCT CGGCATCTCC
ATGATCGGCG TCGCCGAGGC CATGAGCCTG GGCGTCGCGC TGGGCATGGA GCCCAAGGTG
CTGGCCGGCG TAATCAACAG CTCCAGCGGC CGCTGCTGGA GTTCGGACAG CTACAACCCC
TTCCCCGGCG TCATGGACAA CGTGCCCGCC GCGCACGGCT ACAGCGGCGG CTTCGGCACC
GACCTGATGC TCAAGGACCT CGGCCTGGCC AGCGAGGCCG CCCGCCAGGC GCGCCAGCCG
GTGATCCTCG GCGCCCTCGC CCAGCAGCTC TACCAGGCGT TCAGCGCCCA GGGCAACGGC
GCCCTGGACT TCTCCGCGAT CGTCAACCTC TACCGCAAGG ACGCCAACGC ATGA
 
Protein sequence
MHIGFIGLGN MGAPMARNLL AAGHRLSVHD LSAPAVAGLA QAGATVADSP AALAREVELI 
ITMLPASAHV KGVYLGEDGL LAQVRPGVML IDSSTIDPLS AREVAAAARE HGNPMLDAPV
SGGTAGAAAG TLTFMVGGET ADFERARPVL AAMGKNIVHC GPAGNGQVAK VANNMLLGIS
MIGVAEAMSL GVALGMEPKV LAGVINSSSG RCWSSDSYNP FPGVMDNVPA AHGYSGGFGT
DLMLKDLGLA SEAARQARQP VILGALAQQL YQAFSAQGNG ALDFSAIVNL YRKDANA