Gene Avin_10430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10430 
SymbolnhaA 
ID7759988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp988544 
End bp989878 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content67% 
IMG OID643803948 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_002798250 
Protein GI226943177 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.745936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGTCCG CGCAGCGCCT GGCCGACAGA GCTTTCGACG CCCTCGAGCG TTTCCTCCAC 
ATAGAAGCGG TCAGCGGCAT CGTCCTGCTG ATTTCCGCCG CCACGGCGCT GATCTGGGCC
AACTCGCCGG CCGCAGCGAG CTATGCGCAT CTGTGGCATA CGCCGCTCAC CTTCGGAATC
GGCGAGCATG TCGTCTCGCA TTCCCTGCAC TTCTGGATCA ACGACGCGTT GATGACGGTG
TTTTTCCTGG TCGTCGGCAT GGAGATCCGC AGGGAAATCC ATGCCGGAGC CCTGGCGAGT
CTCGGCCAGG CCGCCCTGCC CATGGTGGCG GCCCTGGGCG GCGTGGCGAT GCCGGCGCTT
GTGTACCTCT CCGTCAACGG CGGCGAAGGT CTTCGCCAGG GCTGGGCGGT ACCGACGGCG
ACCGACATCG CCTTCGCCGT GGGGGTGCTG GCCTTGCTGG GCAAATCGAT TCCCGGTTCC
GTGCGGGTCT TTCTGCTGGC CCTGGCGATC ATCGACGACA TCGCTGCGGT ACTGATCATC
GCGCTGTTCT TTTCGGGCGG GCTCGATCCG GCGGGCTTCC TGATCGCGGG AGTCGGAATA
GCGCTGGTAC TGGGCTTCCA GCAGATCGGC ATCGGCTCGG CCTATGCCTA CGTCATCCCC
GGCGCCCTGG TGTGGTTCGG TCTGCTGTGG AGCGGGGCGC ATCCGACGCT GGCGGGCGTG
ATTCTCGGCT TGATGACGCC GGTCTTCCCG GCGCGCAGCG TCGAGAGCCC CATCGAAACG
GCGACATGCG CCATCAAGGA CTTCGTCGAG CGAGTGCAGC ATGGCTCGGA GGATGCGCAC
CGCCTGATGC AGCCGGTGAA GCGGCTCCGC CACGCGCAGC GCGAACTGCT GCCGCCCGTC
GTCCGTGTGC AGATGGCGCT GCATCCGTGG GTCGCCTATG CGGTCATGCC GCTGTTCGCG
CTCGCCAACG CCGGCGTGAA CCTCGATGGC GTCGATCCGG GAAATGGCGG CTCGTCGAGC
GTGGTGCTCG GCGTTTCGCT GGCCCTGATC GTCGGCAAGC CGCTGGGCAT CATGCTCAGC
AGCTGGATAC TGGTCCGCCT GGGCTGGTGC CGTCTCCCGG AAGGCATGAA CTGGTCGTGG
ATGTGGCTGA TCGGCTGTCT GGCCGGTATC GGCTTCACCA TGTCGATCTT CATCGCCACG
CTCGCCTTCG ACGATGCCAG CCTGCTGAGC GCCGCGAAGC TGGGGGTGCT TCTCGCCTCG
GGGCTGGCCG GAGCGATCGG CCTCGTTCTC GGACGTATCC TGGTCTTGCG CGCAAGGGCC
GCCGACAGCC GCTGA
 
Protein sequence
MPSAQRLADR AFDALERFLH IEAVSGIVLL ISAATALIWA NSPAAASYAH LWHTPLTFGI 
GEHVVSHSLH FWINDALMTV FFLVVGMEIR REIHAGALAS LGQAALPMVA ALGGVAMPAL
VYLSVNGGEG LRQGWAVPTA TDIAFAVGVL ALLGKSIPGS VRVFLLALAI IDDIAAVLII
ALFFSGGLDP AGFLIAGVGI ALVLGFQQIG IGSAYAYVIP GALVWFGLLW SGAHPTLAGV
ILGLMTPVFP ARSVESPIET ATCAIKDFVE RVQHGSEDAH RLMQPVKRLR HAQRELLPPV
VRVQMALHPW VAYAVMPLFA LANAGVNLDG VDPGNGGSSS VVLGVSLALI VGKPLGIMLS
SWILVRLGWC RLPEGMNWSW MWLIGCLAGI GFTMSIFIAT LAFDDASLLS AAKLGVLLAS
GLAGAIGLVL GRILVLRARA ADSR