Gene Avin_10380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10380 
Symbol 
ID7759983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp982793 
End bp984196 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content64% 
IMG OID643803943 
Producthypothetical protein 
Protein accessionYP_002798245 
Protein GI226943172 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGA TTCTGCGTCG GCTGCCGTAT TTGCTGGCCC TGTCGCCCGG ACTCTCGTTC 
GCGGCGGAAG TCGATGGCGC CAGCCTGAGT CCCGCCTGGG GTATTCCCTT CGTGGGAATC
CTGTTGTCGA TCGCCCTGTT TCCATTGTTC GCAGCCCATG TCTGGCATCA TCACTTCGGC
AAGATCACCG CGCTCTGGAC ATTGCTGTTC CTGGTGCCGT TCGCCTTCGC CTTCGGCCCG
CACGACACTT TCGCGGTGAT TGTGCATGCG CTGTTCGCCG AATACCTGCC GTTCATCGTC
CTGCTGTTCT CGCTCTACAC CATTTCCGGC GGCATCCTGG TCTGGGGCAA CCTGCACGGC
TCGCCACGCC TGAACACCAC GCTGCTGGCC ATCGGTGTGG CCCTGGCCTC GCTGATGGGC
ACCACCGGGG CGGCGATGCT GATGATCCGT CCGTTGCTGC GCGCCAACGA CAACCGCAAG
CACCGCGTGC ACGTGGTGGT GTTCTTCATC TTCCTGGTGG CCAATATCGG CGGCGGGCTG
ACGCCTTTGG GCGATCCGCC GCTGTTCCTC GGTTTCCTCA AGGGGGTCGG CTTCTTCTGG
ACGGTCGAGC ACATGTTGCT GCCGGTGCTG CTGTCGAGTG CGGCGCTGCT GACCGTGTTC
TATTTCATCG ACCGTTATTT CTACGCCCGG GAAGACGAAC TGCTGCCGCG CGATCCGTCG
CCGGATTCGC CGCTCAGGCT CTATGGCTCG GTCAACTTCC TGCTGCTCGG CGGGGTGATC
GGCGCCGTGC TGCTGTCGGG AATCTGGAAG CCGGGGGTGG CCTTCACGGT GATGGGCACG
CCGATCGAAT GGCAGAACCT GATGCGCGAT CTGCTGATGC TCGGCCTGGC CCTGGTGTCC
CTGAAGGTCA CGTCGAAGCA GGTGCGCGCC GGTAACGATT TCGACTGGGG GCCGATCCAG
GAGGTCGCCA AGCTGTTCGC CGGGATCTTC CTGACCATAG TGCCGGTGCT CGCCATCCTG
CGCGCCGGCA GCGAAGGCCA CCTGGCCGGT CTGGTGGCGG CGGTGACCCG GACCGACGGC
ACGCCGATCG ACGGCATGTA TTTCTGGATG TCCGGCCTGT TGTCGGGATT TCTCGACAAC
GCGCCGACCT ACCTGGTGTT CTTCAACCTG GCCTCCGGCG ATGCGCAGAC GATGATGAAC
GAGCTGCCGC GGACCTTGGT GGCGGTGTCC ATGGGCTCGG TGTTCATGGG CGCGCTGAGC
TACATCGGCA ACGCGCCGAA CTTCATGGTC AAGGCCATCG CCGACCAGCG CGGCGTGCCG
ATGCCGAGCT TCTTCGGCTA CATGGGCTGG TCGTGCGCCA TCCTGCTGCC CTGGTTCGTG
CTGCTGACGC TGTTCTTTTT CTGA
 
Protein sequence
MKSILRRLPY LLALSPGLSF AAEVDGASLS PAWGIPFVGI LLSIALFPLF AAHVWHHHFG 
KITALWTLLF LVPFAFAFGP HDTFAVIVHA LFAEYLPFIV LLFSLYTISG GILVWGNLHG
SPRLNTTLLA IGVALASLMG TTGAAMLMIR PLLRANDNRK HRVHVVVFFI FLVANIGGGL
TPLGDPPLFL GFLKGVGFFW TVEHMLLPVL LSSAALLTVF YFIDRYFYAR EDELLPRDPS
PDSPLRLYGS VNFLLLGGVI GAVLLSGIWK PGVAFTVMGT PIEWQNLMRD LLMLGLALVS
LKVTSKQVRA GNDFDWGPIQ EVAKLFAGIF LTIVPVLAIL RAGSEGHLAG LVAAVTRTDG
TPIDGMYFWM SGLLSGFLDN APTYLVFFNL ASGDAQTMMN ELPRTLVAVS MGSVFMGALS
YIGNAPNFMV KAIADQRGVP MPSFFGYMGW SCAILLPWFV LLTLFFF