Gene Avin_10190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10190 
Symbol 
ID7759964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp966759 
End bp967871 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID643803924 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_002798226 
Protein GI226943153 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.320471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCCG ATACCGCCGA TTACCCGCAG CTTTTCCTCG AAGACGTCCC CATGATGGAC 
ACCCGCGCCC CGGTGGAATT CGCCGGCGGC GCCTTTCCCA ACGTACTCAA CCTGCCGCTG
ATGACCGACA GCGAGCGGCA GAAGGTCGGC ACCTGCTACA AGCAGCACGG CCAGCGGGCG
GCCATCGAGC TCGGCCACCG GCTGGTATCC GGCCGGACCA AGGAGCTGCG TATCCAGGCC
TGGGCGGATT TCGCCCGCGC CCATCCCGAG GGCTACCTGT ACTGCTTCCG TGGCGGCCTG
CGTTCGCAGA TCGTCCAGCA GTGGCTGAGG GATGAGGCCG GTATCGACTA CCCGCGGGTG
ACTGGCGGCT ACAAGGCGAT GCGCAACTTT CTCCTCGACA CCACCCGCCA GGCCACCGCG
CAGTGCGCGT TCGTGCTGGT CGGCGGTCTC ACCGGCACCG GCAAGACCGA AGTGATCGCC
GCCCTGGGCA ACGCCCTGGA CCTCGAAGGC CACGCCAATC ACCGCGGCTC CAGTTTCGGC
AAGCGGGCCA CGCCGCAGCC GGCGCAGATC GACTTCGAGA ACCGCCTGGC CATCGACATC
CTGCGAAAGC GCGCGGCCGG CGTCGGCCGC TTCGTGCTGG AGGACGAGAG CCGCCTGGTC
GGCAGTTGCT CGTTGCCGCT GGAGCTGCAC CAGGGCATGC AGCGCTATCC GCTGGTCTGG
CTGGAGGACA GCTTCGAAGG GCGCGTCGAG CGCATCCTGC GCGACTACGT GGTTGATCTC
TGCGCCGAGT TCGTCGCCGT CGAAGGACCG CAGGCCGGTT TCGCCGCCTT CGCCGCGCGC
CTCACCCAGA GCCTGGCGAA CATCGTCAAG AGGCTCGGCG GCGAGCGTTA TCAGCGGCTG
TCGACGCTCA TGGCCCGGGC TCTCGCCGAG CAGGAGGCGG GACGTGGCGT CGCGTTGCAC
CGCGACTGGA TCGTCGGCCT GCTGCGTGAG TATTACGACC CCATGTATGC CTATCAGCGT
GAGAGCAAGG CCGAACGCAT CGTCTTTTCC GGCGACCGGG AGGCCGTGCT GGCCTATCTG
CGCGAGTGCG CGGCGGGAGC CGTCGACGGC TGA
 
Protein sequence
MRADTADYPQ LFLEDVPMMD TRAPVEFAGG AFPNVLNLPL MTDSERQKVG TCYKQHGQRA 
AIELGHRLVS GRTKELRIQA WADFARAHPE GYLYCFRGGL RSQIVQQWLR DEAGIDYPRV
TGGYKAMRNF LLDTTRQATA QCAFVLVGGL TGTGKTEVIA ALGNALDLEG HANHRGSSFG
KRATPQPAQI DFENRLAIDI LRKRAAGVGR FVLEDESRLV GSCSLPLELH QGMQRYPLVW
LEDSFEGRVE RILRDYVVDL CAEFVAVEGP QAGFAAFAAR LTQSLANIVK RLGGERYQRL
STLMARALAE QEAGRGVALH RDWIVGLLRE YYDPMYAYQR ESKAERIVFS GDREAVLAYL
RECAAGAVDG