Gene Avin_10000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10000 
Symbol 
ID7759945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp950828 
End bp951583 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID643803905 
Productshort chain dehydrogenase 
Protein accessionYP_002798207 
Protein GI226943134 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00212295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGCA AGGTCTTCGC TGGCAGGGTA TTCGAGCGCC AGGTGGCGCT GATCGGCGGC 
GGCTGCTCCG ACGTCGGCCG GGCGCTGGCG GTACGCCTGG CGCAGGCCGG CGCGAGCCTG
GCGCTGCTCG ACCTCGATGC AACTGCGCTG GACAGCCTGG TCGAGCACCT GGCCGACCAT
CACAACTGCG CGGCGCTCGG ATTGCCCTGC GACCTGACCG ACGCGCAAGC GGTGGAGCGC
GCCGTAACGC TGGTCGGCGA GCGTTTCGGC GGCATCGATC TGCTCGCCTG CTGCGCCGTC
GTCCATCACT GCGGCGGCAT CTGCGACACC GCGCCGGAAG TGTTCCGGCG GGTCATGGAG
GTCAACTTTT TCGGCGCCCT GCATTGCGCC CGGGCGGCGC TACCCGGCCT GCTCGCGCGG
CGCGGGCAGA TCGTCGTGGC CGGGGCGCTG CCCGCCTTCG GTCCGCCGCA GGCCGGCCGT
GGCGCCGAGG CCGCCAGCCG GCAGGCGCTG CTCGGGTTGT TCGAGACGCT GCGCCTGGAG
GTCGCGGCGG ACGGTGTCAA CGTGATGCTG GTGTGTCCCG GCCGCGCCGG CGATCCGGCG
TGCGACGACC CGTCCGGCGC CGAGGCGGCG GGCCGCTTGC CCTCGGCGCA GGACATCGCC
GAGGCGATCT TCCAGGGAGC GTTGCGCCGC CGCCATCTGC TGATGCTGCC CGGCTACGAC
TGGCGCGCCC GGCTGCTGGC GCGGCTCGCG CAATAG
 
Protein sequence
MHRKVFAGRV FERQVALIGG GCSDVGRALA VRLAQAGASL ALLDLDATAL DSLVEHLADH 
HNCAALGLPC DLTDAQAVER AVTLVGERFG GIDLLACCAV VHHCGGICDT APEVFRRVME
VNFFGALHCA RAALPGLLAR RGQIVVAGAL PAFGPPQAGR GAEAASRQAL LGLFETLRLE
VAADGVNVML VCPGRAGDPA CDDPSGAEAA GRLPSAQDIA EAIFQGALRR RHLLMLPGYD
WRARLLARLA Q