Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_10000 |
Symbol | |
ID | 7759945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 950828 |
End bp | 951583 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643803905 |
Product | short chain dehydrogenase |
Protein accession | YP_002798207 |
Protein GI | 226943134 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00212295 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCGCA AGGTCTTCGC TGGCAGGGTA TTCGAGCGCC AGGTGGCGCT GATCGGCGGC GGCTGCTCCG ACGTCGGCCG GGCGCTGGCG GTACGCCTGG CGCAGGCCGG CGCGAGCCTG GCGCTGCTCG ACCTCGATGC AACTGCGCTG GACAGCCTGG TCGAGCACCT GGCCGACCAT CACAACTGCG CGGCGCTCGG ATTGCCCTGC GACCTGACCG ACGCGCAAGC GGTGGAGCGC GCCGTAACGC TGGTCGGCGA GCGTTTCGGC GGCATCGATC TGCTCGCCTG CTGCGCCGTC GTCCATCACT GCGGCGGCAT CTGCGACACC GCGCCGGAAG TGTTCCGGCG GGTCATGGAG GTCAACTTTT TCGGCGCCCT GCATTGCGCC CGGGCGGCGC TACCCGGCCT GCTCGCGCGG CGCGGGCAGA TCGTCGTGGC CGGGGCGCTG CCCGCCTTCG GTCCGCCGCA GGCCGGCCGT GGCGCCGAGG CCGCCAGCCG GCAGGCGCTG CTCGGGTTGT TCGAGACGCT GCGCCTGGAG GTCGCGGCGG ACGGTGTCAA CGTGATGCTG GTGTGTCCCG GCCGCGCCGG CGATCCGGCG TGCGACGACC CGTCCGGCGC CGAGGCGGCG GGCCGCTTGC CCTCGGCGCA GGACATCGCC GAGGCGATCT TCCAGGGAGC GTTGCGCCGC CGCCATCTGC TGATGCTGCC CGGCTACGAC TGGCGCGCCC GGCTGCTGGC GCGGCTCGCG CAATAG
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Protein sequence | MHRKVFAGRV FERQVALIGG GCSDVGRALA VRLAQAGASL ALLDLDATAL DSLVEHLADH HNCAALGLPC DLTDAQAVER AVTLVGERFG GIDLLACCAV VHHCGGICDT APEVFRRVME VNFFGALHCA RAALPGLLAR RGQIVVAGAL PAFGPPQAGR GAEAASRQAL LGLFETLRLE VAADGVNVML VCPGRAGDPA CDDPSGAEAA GRLPSAQDIA EAIFQGALRR RHLLMLPGYD WRARLLARLA Q
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