| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_09990 |
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| Symbol | hrpB |
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| ID | 7759944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 948245 |
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| End bp | 950761 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643803904 |
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| Product | DEAH-box ATP-dependent helicase HrpB |
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| Protein accession | YP_002798206 |
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| Protein GI | 226943133 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.371307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGC TACCCATAGA CGCCGTCCTG CCCGCCCTGC GCGAGGCCCT GTCCCTGCGC
CACGAGGCCG TGCTCGAGGC GCCGCCCGGC GCCGGCAAGA CCACCCGCGT GCCGCTGGCC
CTGCTCGACG AGCCCTGGCT CGAAGGGCAA CGCATCCTGA TGCTCGAACC GCGCCGGCTG
GCCGCGCGGG CCGCCGCCGA GCGCCTGGCC GCCGAATTGG GCGAGACGGT CGGCGAGACG
GTCGGCTACC GCATCCGCCT GGACAGCCGG GTCGGCCCGC GCACGCGCAT CGAGGTGGTC
ACCGAGGGCA TCCTCACCCG CCGCCTGCAG GACGACCCGG CGCTGGAGGG CGTCGGCCTG
GTGATCTTCG ACGAGTTCCA CGAGCGCAGC CTGGACGCCG ACCTGGCCCT GGCGCTGACC
CTCAACGGCC GCGCCCTGCT GCGCGACACG CCGCTGCGGG TGCTGCCGAT GTCCGCCACC
CTGGAGGGCG AACGGCTCGC CGCGCTGCTG GACGATGCGC CGCTGGTGCG CAGCGAGGGG
CGCATGTATC CGGTGGAGAT CCGCTGGGGG CGCCCGTTGC CGCCCGGCGA ACGGATCGAG
CCGCGGCTCC TGCAGACGGT GCTGCAGGCG CTGGAGGATG AGTCCGGCAG CCTGCTGGTG
TTCCTGCCCG GCCAGGCGGA GATCCGCCGC CTCCACGAGC AGCTCGGCGA GGTCCTGGCC
GGGCGCGCCG GCATCCTGCT CTGCCCGCTG CACGGCGAAC TGGACCTGGC CGCCCAGCGC
GCCGCCATCG AGCCGGCCCC GGCCGGCACG CGCAAGGTGG TGCTGGCCAC CAACATCGCC
GAGACCAGCC TGACCATCGA CGGCGTGCGC GTGGTGGTCG ACGCGGGACT GGCGCGGGTG
CCGCGCTTCG ACCCCGGCAG CGGCATGACC CGCCTGGACA CCCAGCGCAT CTCCCGCGCC
TCGGCGACCC AGCGCGCCGG CCGTGCCGGG CGCCTGGAGC CGGGCGTGTG CTACCGGCTG
TGGTCGCAGG CGCAGCACGA ACAACTGCCC GCCCACGACG ACGCGGAGAT TCTCCAGGCC
GATCTCGCCG GGCTCGCCCT GCAACTGGCG CGCTGGGGCG TGGAACCGGC CGAACTGGCC
TGGCTCGATG CACCGCCGGC GGCCGCCTTC GCCCAGGCCC GCGAACTGCT GGCGCGGCTC
GGCGCGCTCG CTCCCAACGG CAGCCTGAGT GCCCATGGCC AGGCCATGGC CGGACTGCCG
GCGCATCCGC GCATCGCCCA CCTTCTGCTG CGCGGCCAGG CGCTGGGCCT CGGCGATTTG
GCCTGCGACG TCGCCGCGCT GCTCGGCGAG CGAGACATCC TGCGCGGCGC CGGCGCCGAC
CTGCACAGCC GGCTGGCCCT GCTCGGCGGC ACGGAGCGGG CCGGGCGCGG CGCCCGGGGC
GGCATGCAGC GCGCCCGCCA GTTGGCCCGC CAGTACCGTG GGCTGCTGCC GAAGGGGGGG
CAGGAGGCGG TCGCCGATCC CGCGCATCCG CGCTGGCTGG GGGCGCTGCT GGCCTTCGCC
TATCCGGACC GCATCGCCTG CCAGCGCCGC CCCGGCGGTG GCGAGTACCG CCTGGCCAAC
GGCCGCGCCG CACTGTTCGC CGAGCCGGAT GCGCTGATGA AGCACGCATG GCTGGTGGTC
GCCGAACTGG GTAGCCGCCA GGGCCAGCGC GAAGAACGCA TCTATCTGGC CGCCGAACTC
GACCCGGCAC TGTTCGAGAC AGTGCTCGCC GAACAGGTGA GCGTGCGCGA CGAACTGGAC
TGGGACGAGC GCGAGGGCGT ATTGCGCGCC GAGCGCCAGC GGCGGGTCGG CGAGCTGGTG
CTGGAGCGTC GGGCGCTGCC GGGGCTCGAC GAGGCGGCGC GCGGCCGGGC GCTGCTCGGC
CTGGTGCGGC GCAAGGGCCT GGAACTGCTG CCCTGGACGC CCGAACTGCG CCAGTGGCAG
GCGCGGGTGG CGCTCCTGCG TCGCCTCGAT CTGGCGGAAA AGGGCGAAAG CGACTGGCCG
GACCTGTCCG GCGCGGCCCT GCTGGCGAGC CTGGAGGACT GGCTGGCGCC GTACCTGGGG
CAGGTCTCGC GGCTCAGCCA TTTCGCCGCG CTGGACCTGC CCGGCATCCT CAGGGGCTTG
CTGCCCTGGC CGTTGCCGCA GCGTCTCGAC GAACTGGCGC CGCCGGCCAT CGCCGTACCG
TCCGGCTCGC GCATCCGCCT CGACTACGCC GAAGAGCCGC CGGTGCTCGC CGTGCGCCTG
CAGGAGCTGT TCGGCCTGGC GCAGACGCCT CGTATCGCCG GCGGGCGGCT GGCGGTCAAG
CTGCACCTGC TGTCGCCGGC GCGCCGGCCG GTGCAGGTCA CCCAGGATCT GGCGAGCTTC
TGGGCCAACA CCTACGCCGA GGTGAAGAAG GATCTCAAGG GCCGCTATCC CAAGCACTAC
TGGCCGGACG ATCCGCTGAT CGCCGAACCC ACCGCCCGCG CCAGGCCGCG GCAGTAG
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| Protein sequence | MNPLPIDAVL PALREALSLR HEAVLEAPPG AGKTTRVPLA LLDEPWLEGQ RILMLEPRRL
AARAAAERLA AELGETVGET VGYRIRLDSR VGPRTRIEVV TEGILTRRLQ DDPALEGVGL
VIFDEFHERS LDADLALALT LNGRALLRDT PLRVLPMSAT LEGERLAALL DDAPLVRSEG
RMYPVEIRWG RPLPPGERIE PRLLQTVLQA LEDESGSLLV FLPGQAEIRR LHEQLGEVLA
GRAGILLCPL HGELDLAAQR AAIEPAPAGT RKVVLATNIA ETSLTIDGVR VVVDAGLARV
PRFDPGSGMT RLDTQRISRA SATQRAGRAG RLEPGVCYRL WSQAQHEQLP AHDDAEILQA
DLAGLALQLA RWGVEPAELA WLDAPPAAAF AQARELLARL GALAPNGSLS AHGQAMAGLP
AHPRIAHLLL RGQALGLGDL ACDVAALLGE RDILRGAGAD LHSRLALLGG TERAGRGARG
GMQRARQLAR QYRGLLPKGG QEAVADPAHP RWLGALLAFA YPDRIACQRR PGGGEYRLAN
GRAALFAEPD ALMKHAWLVV AELGSRQGQR EERIYLAAEL DPALFETVLA EQVSVRDELD
WDEREGVLRA ERQRRVGELV LERRALPGLD EAARGRALLG LVRRKGLELL PWTPELRQWQ
ARVALLRRLD LAEKGESDWP DLSGAALLAS LEDWLAPYLG QVSRLSHFAA LDLPGILRGL
LPWPLPQRLD ELAPPAIAVP SGSRIRLDYA EEPPVLAVRL QELFGLAQTP RIAGGRLAVK
LHLLSPARRP VQVTQDLASF WANTYAEVKK DLKGRYPKHY WPDDPLIAEP TARARPRQ
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