| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_09940 |
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| Symbol | rluE |
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| ID | 7759939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 945059 |
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| End bp | 945691 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643803899 |
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| Product | Pseudouridine synthase, RluE |
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| Protein accession | YP_002798201 |
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| Protein GI | 226943128 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.304404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCC CAGCCCGTCC CGCTCCCCGC CGGCCCGCCG CTCAGGCGCC AACCCGCCGT
CCGGGACCGC CCGAGGCGCC ACAGGCCGCG CCGCGGCTGA TCCTGTTCAA CAAGCCGTTC
GACGTGCTCA CCCAGTTTCG CGGCGGCGAC GGGCGGGCGA CCCTCAAGGA CTTCATCCCG
GTCCCCGGCG TCTATCCGGC CGGCCGCCTG GACCGCGACA GCGAGGGCCT CCTGCTGCTG
ACCGACGACG GCCGCCTGCA GGCGCGCATC GCCGATCCCC GGCACAAGCT GGCCAAGACC
TACTGGGTGC AGGTGGAAGG CGAGCCGGAC GAGGCGCAAC TGCAGCGCCT GCGCGAGGGG
GTGACGCTCA ACGACGGCCC GACCCGCCCG GCCGAGGTGC GCCGGCTCGA TGCGCCCGAA
CTCTGGCCGC GCGACCCGCC GGTGCGCTTT CGCAAGAGCG TGCCGACCGC CTGGCTGGAG
CTGACCATCC GCGAGGGGCG CAACCGCCAA GTGCGGCGCA TGACCGCCGC GGTCGGCCTG
CCGACCCTGC GCCTGGTGCG GGTGCGCATC GGCCCCTGGA GTGTGGACGG TCTGGCGCCG
GGGGAGTGGC GGGAGGCGCC GGCGCGGTTG TGA
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| Protein sequence | MARPARPAPR RPAAQAPTRR PGPPEAPQAA PRLILFNKPF DVLTQFRGGD GRATLKDFIP
VPGVYPAGRL DRDSEGLLLL TDDGRLQARI ADPRHKLAKT YWVQVEGEPD EAQLQRLREG
VTLNDGPTRP AEVRRLDAPE LWPRDPPVRF RKSVPTAWLE LTIREGRNRQ VRRMTAAVGL
PTLRLVRVRI GPWSVDGLAP GEWREAPARL
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