Gene Avin_09360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_09360 
Symbol 
ID7759884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp885996 
End bp886772 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID643803848 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, HpcH/HpaI family 
Protein accessionYP_002798150 
Protein GI226943077 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAA AGCCCCATGT GTTCGCCCGG CTGCGCCAGG GCGACGAAGT CTTCGGCTTG 
CTCAATTCGG TCCCCTCTCC CCTGCTCTGC GAAATGATCG CCGCCGCCGG CTATCACTTC
GTGATTCTCG ACATGGAGCA CCTGCTGCGC TCCGGGGACG AGCTGATGCA CTGCCTGCGC
GCCTGCGAAA GCGCCGGCAT CGCCCCCTGG CTGCGCCTGC CCGAAGTGGA CGAAAAGCTG
ATCGGCCGGG CCCTGGACGC CGGCGTCGAG GCCATCGTGC TGCCGCGCGT GGAAAGCGCC
GCGGAAGTCG AGCGGGCCGT CGCCGCCGCC TGGTTCCCGC CCCGCGGCCG GCGCGGCATC
AGCGGAGGCC GGGTCACCGG CTTCGGCGCC CTGGCCCTGG CGGACTACAT CGAGCGGGCC
AACGACGAGC CGCGCATCGT GCCGATGATC GAAAGCGCTG CCGGCCTCGC GGCCCTGCCG
GAAATCCTCG CCCTGCCGGG GATCGGCATG CTCCTGGAGG GCGCCCTCGA CCTGGCCCTG
GACCTGCGAC TCGGCCCCGA TCCGACCCAC CCGCGGGTCT GGGAAGCGCT GCAGTCGATG
GCCGCCGCCT GCGCCGCCGC CGGCGTGCCC TTCTGCGCCA ACCCGCGCAC CCCCGAACAG
ATCCGCCACT GGCGCGGCCA GGGCATCAGG AGCTTCCTCG CCGGCGAGGA CCGCGGCCTG
CTGCTCGCCG CGCTGAAAAA TCGCCTGAAC AGTTTCCAAT CACCCACAGA AGTCTGA
 
Protein sequence
MIRKPHVFAR LRQGDEVFGL LNSVPSPLLC EMIAAAGYHF VILDMEHLLR SGDELMHCLR 
ACESAGIAPW LRLPEVDEKL IGRALDAGVE AIVLPRVESA AEVERAVAAA WFPPRGRRGI
SGGRVTGFGA LALADYIERA NDEPRIVPMI ESAAGLAALP EILALPGIGM LLEGALDLAL
DLRLGPDPTH PRVWEALQSM AAACAAAGVP FCANPRTPEQ IRHWRGQGIR SFLAGEDRGL
LLAALKNRLN SFQSPTEV