| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_09330 |
|---|
| Symbol | |
|---|
| ID | 7759881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 880821 |
|---|
| End bp | 882599 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643803845 |
|---|
| Product | siderophore biosynthesis protein, IucA/IucC family |
|---|
| Protein accession | YP_002798147 |
|---|
| Protein GI | 226943074 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4264] Siderophore synthetase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0934837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG ACATGACGAA TCACGACCGC GCGGCCATCG GCCAGCGCAT CCTCGACTGC
TGCCTGCGCG AGAACATCCG CGACCTGCTC GGCCGGGCAC GGCCGGGCGC CCTGCCGGCG
GAGCTGGCCG TCCACTGGCC GCAGCCGGCA CAGCCGGACT GGCTGTGCAT CGACCACCTG
GGCTGCGGCG AACTCTGGCT GCCGGTGCGC CGCGGCGCGC CGCTGCAGGA CTGGAGCGCG
GTCGGCGACC GCTGGCTGCG CCGCGAGGGC GACAGCGTGC GTCTGGAGCA GGGCTACCGG
CGCTGGCTCG AGCATCTGGC CAGCGGCCTG GACGCCGAGA GCCTGGCGCT GTTCGCCGAC
TACATCGAGG AAGCCGACTG CGCGGTCGAG CACCGTCGGC TGTGCCGCGA GGCGTACAGC
GCGCACGCCA GCGAACTGGG CGAGATTCTC GCGGAAGCGG ACTGGGGCCG GCGCCTGCTC
GGCATCGACC GCCTGGCCAG CTACCTGGAC CACCCCTTCT ACCCCACCGC GCGGGCCAAG
AGCGGCTTCG GCGCCTCGGC CCTGCAGGGC TACGCCCCGG AGTTCGCGCC GCGCTTTCGT
CTCAACTGGC TGGCCGTGCC CAGGACGCTC CTCGAGCGGC CCAGCGCGCC GCCGGCGCTC
TGGCCGGGCT TCGCCGAAGT CGGCCTGGAC CCGGCGCTGG AGGAGAGCCA CGCGCTGCTG
CCGGTGCATC CGCTGACCTG GCCCGAGCTG GACGCCCACG GCCTGCCGGA AGGCTGCCTG
CGCGCGCCGC ACGGCGCCCT GGAGGTGGAG CCGACCCTCT CGGTGCGCAC CGTGCTGTGC
GTCGCCGAGC CGCGCTGCCA CATCAAGCTG CCGCTGCTGG TGCGTACCCT GGGCGCGCGC
AACCTGCGCC TGATCAAGCC GAGCACCCTG TACGACGGCC ACTGGTTCCA GACCGTCCTC
GAAACCCTCG CCGCCCGCGA CGCCCGGCTC GGCGCGCGCT ACCTGCACGT CGACGAGCAA
CACGGCGGGC ATGCCGCCGG CGAGCGCCAC CTGGCCTACA TCGTGCGCCG CTACCCGACG
GGCCTGGAGC GGGCGAGCCT GGTGCCGGTC GCCGCCCTGG CCAGCCGGCT GCCCGACGGC
CGGCTGCTGG TCGAGGCGCT GGTCGAGCGC TTCCACGGCG GCGACCCGAT GGCCTGGTGG
CGGGACTACC TCGACCTGCT GCTCGGCGTG CACCTGCGTC TCTGGCTGCG CTACGGCATC
GCCCTGGAGG CCAACCAGCA GAACGCCGTG CTGCTCTTCG AGGCCGGCCG CCCGCTGCGC
CTGTTGATGA AGGACAACGA CGCCGCGCGG CTCTGGCCGG CGCGCTTCGC CGCCGCCTGC
GCGGACCTGG CGCCGCGTCT GGCCGAGCTG CGCGACGAGC GGATCCGCGT CGACGGCGTG
CAGCCCTTGG CGGAGATGTT CTGCACCATC ACCCTGCAAC TGAACATCGT CGCGCCGCTG
GAAGCCGTCG CCGAAGCCGG CCTGGCCGGG CGCGAGGCGC TCTACGCCTG CCTGCGCCAG
CGCCTGCGCG CCTGCCTGGA TGCGCTGGAG GACGAGGGCA TCGCCGTCGA GGAGGCGCGC
CGCTTCCTGC TCGACGCCCC GAAACTACCG GTGAAATACC TGCTCAGCGC CGGCAGCCTG
TTCAGCAAGG AGCGCTCCGG CGCGGCCGAC ATCAACAAGT TCTACGGCTA CAGCGCGGCG
AACTTCCTGC AGGATGCGGC CCCATGTCCC GGCGCCTGA
|
|---|
| Protein sequence | MNLDMTNHDR AAIGQRILDC CLRENIRDLL GRARPGALPA ELAVHWPQPA QPDWLCIDHL
GCGELWLPVR RGAPLQDWSA VGDRWLRREG DSVRLEQGYR RWLEHLASGL DAESLALFAD
YIEEADCAVE HRRLCREAYS AHASELGEIL AEADWGRRLL GIDRLASYLD HPFYPTARAK
SGFGASALQG YAPEFAPRFR LNWLAVPRTL LERPSAPPAL WPGFAEVGLD PALEESHALL
PVHPLTWPEL DAHGLPEGCL RAPHGALEVE PTLSVRTVLC VAEPRCHIKL PLLVRTLGAR
NLRLIKPSTL YDGHWFQTVL ETLAARDARL GARYLHVDEQ HGGHAAGERH LAYIVRRYPT
GLERASLVPV AALASRLPDG RLLVEALVER FHGGDPMAWW RDYLDLLLGV HLRLWLRYGI
ALEANQQNAV LLFEAGRPLR LLMKDNDAAR LWPARFAAAC ADLAPRLAEL RDERIRVDGV
QPLAEMFCTI TLQLNIVAPL EAVAEAGLAG REALYACLRQ RLRACLDALE DEGIAVEEAR
RFLLDAPKLP VKYLLSAGSL FSKERSGAAD INKFYGYSAA NFLQDAAPCP GA
|
|---|
| |