Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_09310 |
Symbol | |
ID | 7759879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 877940 |
End bp | 879700 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643803843 |
Product | siderophore biosynthesis protein, IucA/IucC family |
Protein accession | YP_002798145 |
Protein GI | 226943072 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00047621 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGTG TCGCCCGCTC TCCCTACGAA CGCACCCTGG ACGGCGAGGC CCAGCGCCAC GCCATCGACT GCCTGCTCAA CTGCTACCTG CGCGAGTACG CCCTGCCGCG CGGCGAGGCG AGCCTCGACA GCCGGGCGCC GGACCTGCCC ATGAGCCTGC GCCACGCCGA AGGCCGCTGC GTCGGCATCC GGCTGGCCGA CGGCAGCCGC CTGGCGCTGC TCGCCGACCG CGCCAGCGTG CTCGGCCGCT GCCGCTTCGT CAGTCCGCCC TACTTCAAGG GCCACGACCA GGGCTGGCGG CCGCTGGACG CCACCGAACT GGCGCGCCTG CTGCTCGCCC CGCTGAACGG CCCGGAACGC CACGGCGAGC TGCTCGAACA GATCGACAAC AGCCTGCGCA TCACCCGCGC CTTCCTCACC CACGCCCGCG CCGCCAACCA CGATCAGGCA GACACGCTCC TGCGCTCCGA GCAGGGCCAG GTCTGGGGCC ATGCCCTGCA CCCGACGCCG AAAAGCCGCG ACGGCGTCTC CGAGGCCGAC CTGCTGGCCT GCTCGCCGGA GGTCGGCGCG CAGTTCCCGC TGCACTGGTT CCGTGTCGAT CCGGCGCTGA TCCGCCACCA GGGCGACGAC CCGCGCGGCC TGCTCGCCCG GATCGCCGGC GCCGACGACC TCTACCCCTG CCATCCCTGG GAGGTTTCCC GGCTGCTGGC CGACCCGCTG GTCCGCCGGG TGCGCGACCT CGGCCTGCTG GAATACCTCG GTCCGCAGGG CCTGGCGCTC TACCCGACCT CCTCGGTGCG CACCCTCTAC CACCCGGCAT TGAGCCATTT CCTGAAGTTC TCGATCCATG TGCGGCTGAC CAACTGCGTG CGCAAGAACG CCTGGTACGA ACTGGACAGC GCGGTGGCCC TGACCGGCCT GCTCGGTCCG CTGATGCGCG AACTGACCGA CAGCCAGCCG GGCTTCGCGC TGATGCCCGA GCCGGCCGCC AGCACTCTGG ACCTGTCCGC CCACGGCAGC GCGGAGGAGG CCCGCGAGGT CACCGAGTGC TTCGGCATCC TCTACCGGCA GAACCTCGAT GCGGCCAGCC GCGCGCGCTA CCAGCCACGG GTCGCCATGG CCCTGTTCAC CTGGACCCTG GACGGCATCA GCGCCTGCCA GGCGCCGGTC GCGCATTGCG CGGCGCAACT CGGCGTGGAC CAGGCCGAAG CCGCGTTGCG CTGGCTGCGC GCCTACGCCG GACTGCTGCT CGGCGGCTCG CTGCACTGCC TGTTCCGTCA CGGCGTGGCG CTCGAACCGC ACCTGCAGAA CACCCTGCTC GGCTTCGACG CGCAAGGCCT GCCCTGCCGC GTGTGGGTCC GCGACCTGGA AGGCACCAAG CTGGTCCCCG AGCACTGGCC GGCCGAGCGC CTCGCCCACC TCGACGCGCG CACCCGCGCC TCGCTTTACT ACGACGCCGA CAAGGCCTGG AAACGGGTCG CCTACTGCAG CCTGGTCAAC AACCTCGGCG AGGCCGTGTT CCATCTGGCG GACGGCGATG TGGCGCTGGA GGAACGCCTG TGGCGCGAAA TCGCCGATCT CCTCGAAGCC CGGCGCGCAC CGCTCGGCGA TCCGCGGGCG CTGCGCGAGC TGTGCGCCGG CGCGCCCCTG CCGAGCAAGG AAAACTTCAT GACCCGCCTG CTGATGAAGG CCGACCGCGA GGCCGGCTAC ACCGCCCTGC CCAACCCGCT GACCGCCACC TGCCATGGAG AATGCCGATG A
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Protein sequence | MIRVARSPYE RTLDGEAQRH AIDCLLNCYL REYALPRGEA SLDSRAPDLP MSLRHAEGRC VGIRLADGSR LALLADRASV LGRCRFVSPP YFKGHDQGWR PLDATELARL LLAPLNGPER HGELLEQIDN SLRITRAFLT HARAANHDQA DTLLRSEQGQ VWGHALHPTP KSRDGVSEAD LLACSPEVGA QFPLHWFRVD PALIRHQGDD PRGLLARIAG ADDLYPCHPW EVSRLLADPL VRRVRDLGLL EYLGPQGLAL YPTSSVRTLY HPALSHFLKF SIHVRLTNCV RKNAWYELDS AVALTGLLGP LMRELTDSQP GFALMPEPAA STLDLSAHGS AEEAREVTEC FGILYRQNLD AASRARYQPR VAMALFTWTL DGISACQAPV AHCAAQLGVD QAEAALRWLR AYAGLLLGGS LHCLFRHGVA LEPHLQNTLL GFDAQGLPCR VWVRDLEGTK LVPEHWPAER LAHLDARTRA SLYYDADKAW KRVAYCSLVN NLGEAVFHLA DGDVALEERL WREIADLLEA RRAPLGDPRA LRELCAGAPL PSKENFMTRL LMKADREAGY TALPNPLTAT CHGECR
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