Gene Avin_09310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_09310 
Symbol 
ID7759879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp877940 
End bp879700 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content72% 
IMG OID643803843 
Productsiderophore biosynthesis protein, IucA/IucC family 
Protein accessionYP_002798145 
Protein GI226943072 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00047621 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGTG TCGCCCGCTC TCCCTACGAA CGCACCCTGG ACGGCGAGGC CCAGCGCCAC 
GCCATCGACT GCCTGCTCAA CTGCTACCTG CGCGAGTACG CCCTGCCGCG CGGCGAGGCG
AGCCTCGACA GCCGGGCGCC GGACCTGCCC ATGAGCCTGC GCCACGCCGA AGGCCGCTGC
GTCGGCATCC GGCTGGCCGA CGGCAGCCGC CTGGCGCTGC TCGCCGACCG CGCCAGCGTG
CTCGGCCGCT GCCGCTTCGT CAGTCCGCCC TACTTCAAGG GCCACGACCA GGGCTGGCGG
CCGCTGGACG CCACCGAACT GGCGCGCCTG CTGCTCGCCC CGCTGAACGG CCCGGAACGC
CACGGCGAGC TGCTCGAACA GATCGACAAC AGCCTGCGCA TCACCCGCGC CTTCCTCACC
CACGCCCGCG CCGCCAACCA CGATCAGGCA GACACGCTCC TGCGCTCCGA GCAGGGCCAG
GTCTGGGGCC ATGCCCTGCA CCCGACGCCG AAAAGCCGCG ACGGCGTCTC CGAGGCCGAC
CTGCTGGCCT GCTCGCCGGA GGTCGGCGCG CAGTTCCCGC TGCACTGGTT CCGTGTCGAT
CCGGCGCTGA TCCGCCACCA GGGCGACGAC CCGCGCGGCC TGCTCGCCCG GATCGCCGGC
GCCGACGACC TCTACCCCTG CCATCCCTGG GAGGTTTCCC GGCTGCTGGC CGACCCGCTG
GTCCGCCGGG TGCGCGACCT CGGCCTGCTG GAATACCTCG GTCCGCAGGG CCTGGCGCTC
TACCCGACCT CCTCGGTGCG CACCCTCTAC CACCCGGCAT TGAGCCATTT CCTGAAGTTC
TCGATCCATG TGCGGCTGAC CAACTGCGTG CGCAAGAACG CCTGGTACGA ACTGGACAGC
GCGGTGGCCC TGACCGGCCT GCTCGGTCCG CTGATGCGCG AACTGACCGA CAGCCAGCCG
GGCTTCGCGC TGATGCCCGA GCCGGCCGCC AGCACTCTGG ACCTGTCCGC CCACGGCAGC
GCGGAGGAGG CCCGCGAGGT CACCGAGTGC TTCGGCATCC TCTACCGGCA GAACCTCGAT
GCGGCCAGCC GCGCGCGCTA CCAGCCACGG GTCGCCATGG CCCTGTTCAC CTGGACCCTG
GACGGCATCA GCGCCTGCCA GGCGCCGGTC GCGCATTGCG CGGCGCAACT CGGCGTGGAC
CAGGCCGAAG CCGCGTTGCG CTGGCTGCGC GCCTACGCCG GACTGCTGCT CGGCGGCTCG
CTGCACTGCC TGTTCCGTCA CGGCGTGGCG CTCGAACCGC ACCTGCAGAA CACCCTGCTC
GGCTTCGACG CGCAAGGCCT GCCCTGCCGC GTGTGGGTCC GCGACCTGGA AGGCACCAAG
CTGGTCCCCG AGCACTGGCC GGCCGAGCGC CTCGCCCACC TCGACGCGCG CACCCGCGCC
TCGCTTTACT ACGACGCCGA CAAGGCCTGG AAACGGGTCG CCTACTGCAG CCTGGTCAAC
AACCTCGGCG AGGCCGTGTT CCATCTGGCG GACGGCGATG TGGCGCTGGA GGAACGCCTG
TGGCGCGAAA TCGCCGATCT CCTCGAAGCC CGGCGCGCAC CGCTCGGCGA TCCGCGGGCG
CTGCGCGAGC TGTGCGCCGG CGCGCCCCTG CCGAGCAAGG AAAACTTCAT GACCCGCCTG
CTGATGAAGG CCGACCGCGA GGCCGGCTAC ACCGCCCTGC CCAACCCGCT GACCGCCACC
TGCCATGGAG AATGCCGATG A
 
Protein sequence
MIRVARSPYE RTLDGEAQRH AIDCLLNCYL REYALPRGEA SLDSRAPDLP MSLRHAEGRC 
VGIRLADGSR LALLADRASV LGRCRFVSPP YFKGHDQGWR PLDATELARL LLAPLNGPER
HGELLEQIDN SLRITRAFLT HARAANHDQA DTLLRSEQGQ VWGHALHPTP KSRDGVSEAD
LLACSPEVGA QFPLHWFRVD PALIRHQGDD PRGLLARIAG ADDLYPCHPW EVSRLLADPL
VRRVRDLGLL EYLGPQGLAL YPTSSVRTLY HPALSHFLKF SIHVRLTNCV RKNAWYELDS
AVALTGLLGP LMRELTDSQP GFALMPEPAA STLDLSAHGS AEEAREVTEC FGILYRQNLD
AASRARYQPR VAMALFTWTL DGISACQAPV AHCAAQLGVD QAEAALRWLR AYAGLLLGGS
LHCLFRHGVA LEPHLQNTLL GFDAQGLPCR VWVRDLEGTK LVPEHWPAER LAHLDARTRA
SLYYDADKAW KRVAYCSLVN NLGEAVFHLA DGDVALEERL WREIADLLEA RRAPLGDPRA
LRELCAGAPL PSKENFMTRL LMKADREAGY TALPNPLTAT CHGECR