| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_09230 |
|---|
| Symbol | hpaI |
|---|
| ID | 7759871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 868662 |
|---|
| End bp | 869567 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643803835 |
|---|
| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| Protein accession | YP_002798137 |
|---|
| Protein GI | 226943064 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.380791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGC CGGTACTCGC GGCGACCTCG CCGGGTGCCG GGCGGGCCAT CCACCTCATC
AATCCCGCCA TGCCCGCATT CCGCGCGGCT TTCGAGGAGA CACTCATGAA AATGCCGCAC
AACGCCTTCA AGGCGGCGCT GCAACGACCG GAAACCCAAT ACGGCATCTG GGCCGGCTTC
GCCAGCGGCT ATGCCGCCGA AATCGTCGCC GGCACCGGCT ACGACTGGAT GCTGATCGAC
GGCGAGCACG CGCCCAACAG CGTGCCGACC ATCCTGGCCC AATTGCAGAG CGTGGCGCCG
TATCCGACCC AGCCGGTGGT GCGGCCGGTC TGTGGCGATC CGGTACTGAT CAAGCAACTG
CTGGATATCG GCGCGCAGAC GCTGATGGTG CCGATGGTGG AAAGCGCCGA GCAGGCGAGG
GCGCTGGTGC GCGCCATGCG CTACCCGCCG CACGGCATCC GCGGCGTCGG CGGCGGCCTG
GCCCGCGCCA CCCGCTGGGA CGGTGTGCCC GACTACCTGA ACACCGCCCA TGAGGAGCTG
TGCCTGATCG TCCAGGTGGA ATCGCGTGCC GGGGTCGAGA ACGTCGAGGC GATCGCCGCC
GTGGAAGGCG TCGACGCGGT GTTCATCGGC CCGGCCGATC TTTCCATCGG CCTCGGCCAT
CCCGGCGATC CGGGCCATCC GCAGGTGCAG GAGCTTATCC ATCACGCCAT CGAGGCCACC
CGCGCCGCCG GCAAGGCCTG CGGCATCCTC GCCCCGCACG AGGAGGACGC CCGCCGCTAC
CGGGAATGGG GCTGCCGGTT CATCGCCGTC GCCATCGACA TCAGCCTGCT GCGCCAGGGC
GCGCTGGCCG GCCTGGCGCG CTTCCGCGAC ACTCCGGCGT CCGACGCGCC CTCGCGCACC
TACTGA
|
|---|
| Protein sequence | MPAPVLAATS PGAGRAIHLI NPAMPAFRAA FEETLMKMPH NAFKAALQRP ETQYGIWAGF
ASGYAAEIVA GTGYDWMLID GEHAPNSVPT ILAQLQSVAP YPTQPVVRPV CGDPVLIKQL
LDIGAQTLMV PMVESAEQAR ALVRAMRYPP HGIRGVGGGL ARATRWDGVP DYLNTAHEEL
CLIVQVESRA GVENVEAIAA VEGVDAVFIG PADLSIGLGH PGDPGHPQVQ ELIHHAIEAT
RAAGKACGIL APHEEDARRY REWGCRFIAV AIDISLLRQG ALAGLARFRD TPASDAPSRT
Y
|
|---|
| |